RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 FAM129BQ96TA1 746 aa12.52□□□□□ -0.41
LIG1-217ENST00000599165 PSMB7Q99436 277 aa12.52□□□□□ -0.41
LIG1-217ENST00000599165 ORAI3Q9BRQ5 295 aa12.52□□□□□ -0.41
LIG1-217ENST00000599165 GPR174Q9BXC1 333 aa12.52□□□□□ -0.41
LIG1-217ENST00000599165 MAGEB5Q9BZ81 275 aa12.52□□□□□ -0.41
LIG1-217ENST00000599165 WDCPQ9H6R7 721 aa12.52□□□□□ -0.41
LIG1-217ENST00000599165 SERGEFQ9UGK8 458 aa12.52□□□□□ -0.41
LIG1-217ENST00000599165 STAP1Q9ULZ2 295 aa12.52□□□□□ -0.41
LIG1-217ENST00000599165 NEU3Q9UQ49 428 aa12.52□□□□□ -0.41
LIG1-217ENST00000599165 TBC1D30Q9Y2I9 924 aa12.52□□□□□ -0.41
LIG1-217ENST00000599165 TMEM131Q92545 1883 aa12.52□□□□□ -0.41
LIG1-217ENST00000599165 METTL12A8MUP2 240 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 TPM2P07951 284 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 SRPRAP08240 638 aaKnown RBP12.51□□□□□ -0.41
LIG1-217ENST00000599165 ENGP17813 658 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 CDK11BP21127 795 aaKnown RBP12.51□□□□□ -0.41
LIG1-217ENST00000599165 HOXD12P35452 270 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 ZNF165P49910 485 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 ECT2LQ008S8 904 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 DEUP1Q05D60 604 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 E2F5Q15329 346 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 C15orf59Q2T9L4 293 aaPredicted RBP12.51□□□□□ -0.41
LIG1-217ENST00000599165 KLHL40Q2TBA0 621 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 PPM1JQ5JR12 505 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 RABGAP1LQ5R372 815 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 TTC39BQ5VTQ0 682 aaPredicted RBP12.51□□□□□ -0.41
LIG1-217ENST00000599165 TRIM72Q6ZMU5 477 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 FAM124AQ86V42 546 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 FAM131BQ86XD5 332 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 ANKRD20A12PQ8NF67 263 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 OR2I1PQ8NGU4 316 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 RXFP2Q8WXD0 754 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 FEM1AQ9BSK4 669 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 TTYH3Q9C0H2 523 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 SIK2Q9H0K1 926 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 SLC12A6Q9UHW9 1150 aa12.51□□□□□ -0.41
LIG1-217ENST00000599165 ACACBO00763 2458 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 A0A1B0GTH6 734 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 SYCE3A1L190 88 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 ZBTB24O43167 697 aaPredicted RBP12.5□□□□□ -0.41
LIG1-217ENST00000599165 SERPINF2P08697 491 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 RDXP35241 583 aaKnown RBP12.5□□□□□ -0.41
LIG1-217ENST00000599165 RFC1P35251 1148 aaPredicted RBP12.5□□□□□ -0.41
LIG1-217ENST00000599165 VASPP50552 380 aaPredicted RBP12.5□□□□□ -0.41
LIG1-217ENST00000599165 METAP1P53582 386 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 HDAC4P56524 1084 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 ATP11AP98196 1134 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 BNC1Q01954 994 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 SLC12A1Q13621 1099 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 DUOXA1Q1HG43 343 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 PPP1R15BQ5SWA1 713 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 MANEALQ5VSG8 457 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 DCAF12L1Q5VU92 463 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 CADM4Q8NFZ8 388 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 CENPIQ92674 756 aaPredicted RBP12.5□□□□□ -0.41
LIG1-217ENST00000599165 C1orf74Q96LT6 269 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 PCMTD1Q96MG8 357 aaPredicted RBP12.5□□□□□ -0.41
LIG1-217ENST00000599165 AGPAT1Q99943 283 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 PABPC3Q9H361 631 aaKnown RBP12.5□□□□□ -0.41
LIG1-217ENST00000599165 C6orf106Q9H6K1 298 aaPredicted RBP12.5□□□□□ -0.41
LIG1-217ENST00000599165 FBRSQ9HAH7 460 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 CBX8Q9HC52 389 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 TAS2R14Q9NYV8 317 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 MPP6Q9NZW5 540 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 SUN2Q9UH99 717 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 SLC6A14Q9UN76 642 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 CHD8Q9HCK8 2581 aa12.5□□□□□ -0.41
LIG1-217ENST00000599165 A0A0D9SEW6 157 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 TARSL2A2RTX5 802 aaKnown RBP12.49□□□□□ -0.41
LIG1-217ENST00000599165 E9PAM4 449 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 FAM72CH0Y354 149 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 RNF103O00237 685 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 GIPC1O14908 333 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 SNAP91O60641 907 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 NDUFS2O75306 463 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 CLDN11O75508 207 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 GJB3O75712 270 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 MT-CO1P00395 513 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 F9P00740 461 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 OXTRP30559 389 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 PBX1P40424 430 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 PTPN9P43378 593 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 CDH4P55283 916 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 OGDHQ02218 1023 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 ZBTB16Q05516 673 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 MTA1Q13330 715 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 FAM72AQ5TYM5 149 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 ZNF776Q68DI1 518 aaPredicted RBP12.49□□□□□ -0.41
LIG1-217ENST00000599165 FAM72DQ6L9T8 149 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 FAM72BQ86X60 149 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 DNAAF5Q86Y56 855 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 STK40Q8N2I9 435 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 AADATQ8N5Z0 425 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 FAM131CQ96AQ9 280 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 NUP58Q9BVL2 599 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 NAT10Q9H0A0 1025 aaKnown RBP12.49□□□□□ -0.41
LIG1-217ENST00000599165 TMEM9BQ9NQ34 198 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 ADAM22Q9P0K1 906 aa12.49□□□□□ -0.41
LIG1-217ENST00000599165 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.49□□□□□ -0.41
LIG1-217ENST00000599165 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms