RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 ADAM23O75077 832 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 ASLP04424 464 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 RARAP10276 462 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 HTR7P34969 479 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 TPI1P60174 286 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 KRT83P78385 493 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 SLC25A11Q02978 314 aaKnown RBP14.75□□□□□ -0.05
LIG1-208ENST00000595758 ZNF234Q14588 700 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 SMTNL2Q2TAL5 461 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 PPP6R3Q5H9R7 873 aaPredicted RBP14.75□□□□□ -0.05
LIG1-208ENST00000595758 KCNT1Q5JUK3 1230 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 TSSK4Q6SA08 328 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 NLRP14Q86W24 1093 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 CPNE8Q86YQ8 564 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 CCDC112Q8NEF3 446 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 OR52K2Q8NGK3 314 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 TEKT4Q8WW24 435 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 HSPH1Q92598 858 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 ALG14Q96F25 216 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 KCTD15Q96SI1 283 aaPredicted RBP14.75□□□□□ -0.05
LIG1-208ENST00000595758 MUC3BQ9H195 1237 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 TMEM248Q9NWD8 314 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 VPS28Q9UK41 221 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 NEU3Q9UQ49 428 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 OR51B4Q9Y5P0 310 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 STON1Q9Y6Q2 735 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 CACNA1HO95180 2353 aa14.75□□□□□ -0.05
LIG1-208ENST00000595758 MUC6Q6W4X9 2439 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 A0A0A6YYK5 440 aaPredicted RBP14.74□□□□□ -0.05
LIG1-208ENST00000595758 ILVBLA1L0T0 632 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 WASH3PC4AMC7 463 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 H0Y858 1186 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 K7ESF4 209 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 EEF2KO00418 725 aaKnown RBP14.74□□□□□ -0.05
LIG1-208ENST00000595758 FGF10O15520 208 aaPredicted RBP14.74□□□□□ -0.05
LIG1-208ENST00000595758 HOXB2P14652 356 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 HOXC13P31276 330 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 IL12RB1P42701 662 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 MAPKAPK2P49137 400 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 DGKEP52429 567 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 VAV2P52735 878 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 ZNF135P52742 658 aaPredicted RBP14.74□□□□□ -0.05
LIG1-208ENST00000595758 HADHBP55084 474 aaKnown RBP14.74□□□□□ -0.05
LIG1-208ENST00000595758 ECT2LQ008S8 904 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 SULT2A1Q06520 285 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 TCF15Q12870 199 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 CRY1Q16526 586 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 PTPRNQ16849 979 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 FNDC3BQ53EP0 1204 aaKnown RBP14.74□□□□□ -0.05
LIG1-208ENST00000595758 TXNRD3NBQ6F5E7 133 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 SERPINA13PQ6UXR4 307 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 TMEM92Q6UXU6 159 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 ZNF783Q6ZMS7 281 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 KIAA1328Q86T90 577 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 CAMKK1Q8N5S9 505 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 GABRG3Q99928 467 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 DESI2Q9BSY9 194 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 SPON2Q9BUD6 331 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 CATSPERBQ9H7T0 1116 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.74□□□□□ -0.05
LIG1-208ENST00000595758 DNAI1Q9UI46 699 aa14.74□□□□□ -0.05
LIG1-208ENST00000595758 A0A0D9SEW6 157 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 RCCD1A6NED2 376 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 DAPK3O43293 454 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 APBB3O95704 486 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 SP9P0CG40 484 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 TDGF1P13385 188 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 COL9A1P20849 921 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 HOXA6P31267 233 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 GJC1P36383 396 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 SLC1A1P43005 524 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 CTSOP43234 321 aaPredicted RBP14.73□□□□□ -0.05
LIG1-208ENST00000595758 HCAR3P49019 387 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 NUMBP49757 651 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 PTPN5P54829 565 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 NRLP54845 237 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 TAS2R40P59535 323 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 ST8SIA6P61647 398 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 GNA12Q03113 381 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 ENPP2Q13822 863 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 GSE1Q14687 1217 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 DPYSL2Q16555 572 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 ZNF528Q3MIS6 628 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 RFX8Q6ZV50 586 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 LRRC8AQ8IWT6 810 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 TXLNBQ8N3L3 684 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 RTL3Q8N8U3 475 aaKnown RBP14.73□□□□□ -0.05
LIG1-208ENST00000595758 TSTD1Q8NFU3 115 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 OR7D4Q8NG98 312 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 HHIPQ96QV1 700 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 C2orf49Q9BVC5 232 aaPredicted RBP14.73□□□□□ -0.05
LIG1-208ENST00000595758 LACRTQ9GZZ8 138 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 IRF2BPLQ9H1B7 796 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 POLMQ9NP87 494 aaPredicted RBP14.73□□□□□ -0.05
LIG1-208ENST00000595758 NDFIP2Q9NV92 336 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 DONSONQ9NYP3 566 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 CWC15Q9P013 229 aaKnown RBP14.73□□□□□ -0.05
LIG1-208ENST00000595758 ERVW-1Q9UQF0 538 aa14.73□□□□□ -0.05
LIG1-208ENST00000595758 A0A1W2PQF6 199 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 BTNL10A8MVZ5 291 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms