RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 MSI1O43347 362 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-208ENST00000595726 RTN2O75298 545 aa14.25□□□□□ -0.13
SHKBP1-208ENST00000595726 ASS1P00966 412 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-208ENST00000595726 STAT4Q14765 748 aa14.25□□□□□ -0.13
SHKBP1-208ENST00000595726 ZNF394Q53GI3 561 aa14.25□□□□□ -0.13
SHKBP1-208ENST00000595726 BHLHA9Q7RTU4 235 aa14.25□□□□□ -0.13
SHKBP1-208ENST00000595726 PRPF39Q86UA1 669 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-208ENST00000595726 FMR1NBQ8N0W7 255 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-208ENST00000595726 GOLGA5Q8TBA6 731 aa14.25□□□□□ -0.13
SHKBP1-208ENST00000595726 EXTL1Q92935 676 aa14.25□□□□□ -0.13
SHKBP1-208ENST00000595726 MYEOVQ96EZ4 313 aa14.25□□□□□ -0.13
SHKBP1-208ENST00000595726 APOLD1Q96LR9 279 aa14.25□□□□□ -0.13
SHKBP1-208ENST00000595726 MYOCQ99972 504 aa14.25□□□□□ -0.13
SHKBP1-208ENST00000595726 STARD5Q9NSY2 213 aa14.25□□□□□ -0.13
SHKBP1-208ENST00000595726 CYTH4Q9UIA0 394 aa14.25□□□□□ -0.13
SHKBP1-208ENST00000595726 STOML2Q9UJZ1 356 aa14.25□□□□□ -0.13
SHKBP1-208ENST00000595726 U3KQA8 63 aa14.25□□□□□ -0.13
SHKBP1-208ENST00000595726 CASC3O15234 703 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 IL1BP01584 269 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 FAM87AP0C7U9 286 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 VAV1P15498 845 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 ITGB6P18564 788 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 TGM2P21980 687 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 SLC6A4P31645 630 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 DRD3P35462 400 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 AP3M2P53677 418 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 INCA1Q0VD86 236 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 SRSF6Q13247 344 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 ZACNQ401N2 412 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 HS1BP3Q53T59 392 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 FSCBQ5H9T9 825 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 PIK3R6Q5UE93 754 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 SV2AQ7L0J3 742 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 PIGZQ86VD9 579 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 IQCHQ86VS3 1027 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 ARHGAP18Q8N392 663 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 MAPK15Q8TD08 544 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 TMEM174Q8WUU8 243 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 CCDC47Q96A33 483 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 ULBP1Q9BZM6 244 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 APOBEC3GQ9HC16 384 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 ERVW-1Q9UQF0 538 aa14.24□□□□□ -0.13
SHKBP1-208ENST00000595726 DOCK9Q9BZ29 2069 aa14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 TARSL2A2RTX5 802 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 GOLGA6L4A6NEF3 574 aa14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 TULP2O00295 520 aa14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 PDXKO00764 312 aa14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 HLA-DRAP01903 254 aa14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 C5AR1P21730 350 aa14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 TKTL1P51854 596 aa14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 UBAP2LQ14157 1087 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 SGO2Q562F6 1265 aa14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 ZNF542PQ5EBM4 170 aa14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 SLC9A9Q8IVB4 645 aa14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 MFN1Q8IWA4 741 aa14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 IFI44Q8TCB0 444 aa14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 KLK6Q92876 244 aa14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 PTPRN2Q92932 1015 aa14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 ARRDC3Q96B67 414 aa14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 KLHDC7BQ96G42 594 aa14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 RPL10LQ96L21 214 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 HEXIM2Q96MH2 286 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 CCNL2Q96S94 520 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 DMAC2Q9NW81 257 aa14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 HBS1LQ9Y450 684 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 ENTPD2Q9Y5L3 495 aa14.23□□□□□ -0.13
SHKBP1-208ENST00000595726 CDRT15L2A8MXV6 281 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 MAGEC1O60732 1142 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 NEBLO76041 1014 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 TNFSF15O95150 251 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 ZBED1O96006 694 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 AFPP02771 609 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 NR3C1P04150 777 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 GP1BBP13224 206 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 TRIM21P19474 475 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 MZF1P28698 734 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 PIK3CAP42336 1068 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 ZNF445P59923 1031 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 KCNMA1Q12791 1236 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 OVGP1Q12889 678 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 PNOCQ13519 176 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 ARID5BQ14865 1188 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 FAM133BQ5BKY9 247 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 RAB41Q5JT25 222 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 C1orf220Q5T0J3 134 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 PM20D1Q6GTS8 502 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 IGF2-ASQ6U949 168 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 CRTC1Q6UUV9 634 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 CARNMT1Q8N4J0 409 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 FIBINQ8TAL6 211 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 RNF139Q8WU17 664 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 TAF4BQ92750 862 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 CCDC97Q96F63 343 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 CCDC34Q96HJ3 373 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 ARHGAP9Q9BRR9 750 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 KLHL11Q9NVR0 708 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 TRAF3IP3Q9Y228 551 aa14.22□□□□□ -0.13
SHKBP1-208ENST00000595726 TDRD6O60522 2096 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 EDDM13A0A1B0GTR0 161 aa14.21□□□□□ -0.13
SHKBP1-208ENST00000595726 CPED1A4D0V7 1026 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms