RNA–Protein interactions for RNA: ENST00000592628.5

TCF3-217, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-217ENST00000592628 ITFG1Q8TB96 612 aa16.07■□□□□ 0.16
TCF3-217ENST00000592628 CCDC110Q8TBZ0 833 aa16.07■□□□□ 0.16
TCF3-217ENST00000592628 ING5Q8WYH8 240 aa16.07■□□□□ 0.16
TCF3-217ENST00000592628 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.07■□□□□ 0.16
TCF3-217ENST00000592628 LRRC45Q96CN5 670 aa16.07■□□□□ 0.16
TCF3-217ENST00000592628 DDX50Q9BQ39 737 aaKnown RBP16.07■□□□□ 0.16
TCF3-217ENST00000592628 BRD8Q9H0E9 1235 aa16.07■□□□□ 0.16
TCF3-217ENST00000592628 LSM7Q9UK45 103 aaKnown RBP16.07■□□□□ 0.16
TCF3-217ENST00000592628 CCL26Q9Y258 94 aa16.07■□□□□ 0.16
TCF3-217ENST00000592628 MRPS23Q9Y3D9 190 aaKnown RBP16.07■□□□□ 0.16
TCF3-217ENST00000592628 SH3BP1Q9Y3L3 701 aa16.07■□□□□ 0.16
TCF3-217ENST00000592628 C5orf60A6NFR6 353 aa16.06■□□□□ 0.16
TCF3-217ENST00000592628 SOBPA7XYQ1 873 aa16.06■□□□□ 0.16
TCF3-217ENST00000592628 LINC01565O15544 149 aa16.06■□□□□ 0.16
TCF3-217ENST00000592628 GCATO75600 419 aa16.06■□□□□ 0.16
TCF3-217ENST00000592628 CEBPBP17676 345 aa16.06■□□□□ 0.16
TCF3-217ENST00000592628 NDST2P52849 883 aa16.06■□□□□ 0.16
TCF3-217ENST00000592628 RABGAP1LQ5R372 815 aa16.06■□□□□ 0.16
TCF3-217ENST00000592628 EMBQ6PCB8 327 aa16.06■□□□□ 0.16
TCF3-217ENST00000592628 BBOF1Q8ND07 529 aa16.06■□□□□ 0.16
TCF3-217ENST00000592628 SH3RF2Q8TEC5 729 aa16.06■□□□□ 0.16
TCF3-217ENST00000592628 ZSWIM3Q96MP5 696 aa16.06■□□□□ 0.16
TCF3-217ENST00000592628 DZANK1Q9NVP4 752 aa16.06■□□□□ 0.16
TCF3-217ENST00000592628 ZNF446Q9NWS9 450 aa16.06■□□□□ 0.16
TCF3-217ENST00000592628 DONSONQ9NYP3 566 aa16.06■□□□□ 0.16
TCF3-217ENST00000592628 SEPT10Q9P0V9 454 aa16.06■□□□□ 0.16
TCF3-217ENST00000592628 PAK5Q9P286 719 aa16.06■□□□□ 0.16
TCF3-217ENST00000592628 ANAPC5Q9UJX4 755 aa16.06■□□□□ 0.16
TCF3-217ENST00000592628 TPX2Q9ULW0 747 aaKnown RBP16.06■□□□□ 0.16
TCF3-217ENST00000592628 KCNK1O00180 336 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 OR1E1P30953 314 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 ACTN2P35609 894 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 PAPOLAP51003 745 aaKnown RBP16.05■□□□□ 0.16
TCF3-217ENST00000592628 CDH4P55283 916 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 WASHC5Q12768 1159 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 CBX2Q14781 532 aaPredicted RBP16.05■□□□□ 0.16
TCF3-217ENST00000592628 RARS2Q5T160 578 aaKnown RBP16.05■□□□□ 0.16
TCF3-217ENST00000592628 HIBCHQ6NVY1 386 aaPredicted RBP16.05■□□□□ 0.16
TCF3-217ENST00000592628 RHBDF2Q6PJF5 856 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 TMEM184AQ6ZMB5 413 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 CCDC13Q8IYE1 715 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 USP13Q92995 863 aaPredicted RBP16.05■□□□□ 0.16
TCF3-217ENST00000592628 FMO2Q99518 471 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 APOL5Q9BWW9 433 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 CHD5Q8TDI0 1954 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 PRRC2BQ5JSZ5 2229 aaKnown RBP16.05■□□□□ 0.16
TCF3-217ENST00000592628 GFRA2O00451 464 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 MAFKO60675 156 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 MAPKAPK2P49137 400 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 ANKRD20A2Q5SQ80 823 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 RNASEH2BQ5TBB1 312 aaKnown RBP16.05■□□□□ 0.16
TCF3-217ENST00000592628 ANKRD20A1Q5TYW2 823 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 ANKRD20A3Q5VUR7 823 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 BBS7Q8IWZ6 715 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 FAM217AQ8IXS0 508 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 ATPAF2Q8N5M1 289 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 EFHBQ8N7U6 833 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 RIN3Q8TB24 985 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 CPT1BQ92523 772 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 CAVIN3Q969G5 261 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 TSGA13Q96PP4 275 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 FERMT1Q9BQL6 677 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 CEP41Q9BYV8 373 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 FAM129AQ9BZQ8 928 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 TDP1Q9NUW8 608 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 ZNF510Q9Y2H8 683 aa16.05■□□□□ 0.16
TCF3-217ENST00000592628 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.04■□□□□ 0.16
TCF3-217ENST00000592628 A0A0A0MRY4 1105 aa16.04■□□□□ 0.16
TCF3-217ENST00000592628 RASA4BC9J798 803 aa16.04■□□□□ 0.16
TCF3-217ENST00000592628 RNF103O00237 685 aa16.04■□□□□ 0.16
TCF3-217ENST00000592628 RASA4O43374 803 aa16.04■□□□□ 0.16
TCF3-217ENST00000592628 PRAMEF12O95522 483 aa16.04■□□□□ 0.16
TCF3-217ENST00000592628 CCNCP24863 283 aa16.04■□□□□ 0.16
TCF3-217ENST00000592628 PTPN3P26045 913 aa16.04■□□□□ 0.16
TCF3-217ENST00000592628 CAV1Q03135 178 aa16.04■□□□□ 0.16
TCF3-217ENST00000592628 ZNF33AQ06730 810 aa16.04■□□□□ 0.16
TCF3-217ENST00000592628 ZSCAN18Q8TBC5 510 aaPredicted RBP16.04■□□□□ 0.16
TCF3-217ENST00000592628 HMCESQ96FZ2 354 aa16.04■□□□□ 0.16
TCF3-217ENST00000592628 SPATA13Q96N96 652 aa16.04■□□□□ 0.16
TCF3-217ENST00000592628 RETREG1Q9H6L5 497 aa16.04■□□□□ 0.16
TCF3-217ENST00000592628 MTRF1LQ9UGC7 380 aaKnown RBP16.04■□□□□ 0.16
TCF3-217ENST00000592628 CDH22Q9UJ99 828 aa16.04■□□□□ 0.16
TCF3-217ENST00000592628 FARP1Q9Y4F1 1045 aaPredicted RBP16.04■□□□□ 0.16
TCF3-217ENST00000592628 REV3LO60673 3130 aa16.04■□□□□ 0.16
TCF3-217ENST00000592628 RAMP2O60895 175 aa16.03■□□□□ 0.16
TCF3-217ENST00000592628 CLDN11O75508 207 aa16.03■□□□□ 0.16
TCF3-217ENST00000592628 METTL18O95568 372 aa16.03■□□□□ 0.16
TCF3-217ENST00000592628 TNNT3P45378 269 aaPredicted RBP16.03■□□□□ 0.16
TCF3-217ENST00000592628 BASP1P80723 227 aaKnown RBP16.03■□□□□ 0.16
TCF3-217ENST00000592628 ZBTB17Q13105 803 aa16.03■□□□□ 0.16
TCF3-217ENST00000592628 POLD3Q15054 466 aaPredicted RBP16.03■□□□□ 0.16
TCF3-217ENST00000592628 LRIT3Q3SXY7 679 aa16.03■□□□□ 0.16
TCF3-217ENST00000592628 ANKRD22Q5VYY1 191 aa16.03■□□□□ 0.16
TCF3-217ENST00000592628 ANKRD54Q6NXT1 300 aa16.03■□□□□ 0.16
TCF3-217ENST00000592628 SYCE2Q6PIF2 218 aa16.03■□□□□ 0.16
TCF3-217ENST00000592628 PCGF5Q86SE9 256 aa16.03■□□□□ 0.16
TCF3-217ENST00000592628 GPR149Q86SP6 731 aa16.03■□□□□ 0.16
TCF3-217ENST00000592628 LRRC49Q8IUZ0 686 aa16.03■□□□□ 0.16
TCF3-217ENST00000592628 ZNF567Q8N184 647 aa16.03■□□□□ 0.16
TCF3-217ENST00000592628 OR52K2Q8NGK3 314 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms