RNA–Protein interactions for RNA: ENST00000590901.5

CXXC1-214, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 2,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-214ENST00000590901 A0A0J9YVX5 310 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 TCRBV9S1A1TA0A576 114 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 TRIM49D1C9J1S8 452 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 CYB561D2O14569 222 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 ELK3P41970 407 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 VEGFBP49765 207 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 SFSWAPQ12872 951 aaKnown RBP15.92■□□□□ 0.14
CXXC1-214ENST00000590901 CES4AQ5XG92 561 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 FBXL19Q6PCT2 694 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 NPNTQ6UXI9 565 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 LIMS2Q7Z4I7 341 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 NIPA2Q8N8Q9 360 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 NETO2Q8NC67 525 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 ICA1LQ8NDH6 482 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 APPL2Q8NEU8 664 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 IRGQQ8WZA9 623 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 ADAM2Q99965 735 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 ZNF395Q9H8N7 513 aaPredicted RBP15.92■□□□□ 0.14
CXXC1-214ENST00000590901 GDAP2Q9NXN4 497 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 DDX56Q9NY93 547 aaKnown RBP15.92■□□□□ 0.14
CXXC1-214ENST00000590901 SORCS3Q9UPU3 1222 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 PLLPQ9Y342 182 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 M0QZ92 97 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 ALDH1A1P00352 501 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 OTUD4Q01804 1114 aaKnown RBP15.92■□□□□ 0.14
CXXC1-214ENST00000590901 FOLH1Q04609 750 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 TBL3Q12788 808 aaKnown RBP15.92■□□□□ 0.14
CXXC1-214ENST00000590901 TTC39BQ5VTQ0 682 aaPredicted RBP15.92■□□□□ 0.14
CXXC1-214ENST00000590901 PPP1R2P3Q6NXS1 205 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 IGDCC3Q8IVU1 814 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 ACTL9Q8TC94 416 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 RSAD2Q8WXG1 361 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 SLC4A5Q9BY07 1137 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 USP29Q9HBJ7 922 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 SIRPGQ9P1W8 387 aa15.92■□□□□ 0.14
CXXC1-214ENST00000590901 RANBP2P49792 3224 aaKnown RBP15.92■□□□□ 0.14
CXXC1-214ENST00000590901 MYBPHLA2RUH7 354 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 PEX1O43933 1283 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 BRCC3P46736 316 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 EPHB1P54762 984 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 YWHAGP61981 247 aaKnown RBP eCLIP15.91■□□□□ 0.14
CXXC1-214ENST00000590901 PCBP1Q15365 356 aaKnown RBP eCLIP15.91■□□□□ 0.141e-6■■■■□ 19.9
CXXC1-214ENST00000590901 KLHDC10Q6PID8 442 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 C1orf228Q6PIY5 440 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 CD300LGQ6UXG3 332 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 NUDCD3Q8IVD9 361 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 KCNK16Q96T55 309 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 CRTAC1Q9NQ79 661 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 USP18Q9UMW8 372 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 CASP8AP2Q9UKL3 1982 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.91■□□□□ 0.14
CXXC1-214ENST00000590901 SDR42E2A6NKP2 422 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 KBTBD13C9JR72 458 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 CASQ2O14958 399 aaPredicted RBP15.91■□□□□ 0.14
CXXC1-214ENST00000590901 CLPTM1O96005 669 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 CD4P01730 458 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 NKX3-2P78367 333 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 WASHC5Q12768 1159 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 CYLC2Q14093 348 aaPredicted RBP15.91■□□□□ 0.14
CXXC1-214ENST00000590901 TRAF7Q6Q0C0 670 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 TMEM110Q86TL2 294 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 CRYBG2Q8N1P7 616 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 SENP8Q96LD8 212 aa15.91■□□□□ 0.14
CXXC1-214ENST00000590901 NGRNQ9NPE2 291 aaKnown RBP15.91■□□□□ 0.14
CXXC1-214ENST00000590901 CCDC160A6NGH7 325 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 KPNA6O60684 536 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 ATP6V1G1O75348 118 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 TRUB2O95900 331 aaKnown RBP15.9■□□□□ 0.14
CXXC1-214ENST00000590901 INHAP05111 366 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 TFAP2AP05549 437 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 KDELR1P24390 212 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 SERPINB6P35237 376 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 FDFT1P37268 417 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 DBN1Q16643 649 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 GRAMD1BQ3KR37 738 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 TIGD5Q53EQ6 642 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 SCYL2Q6P3W7 929 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 SLC26A11Q86WA9 606 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 MARVELD2Q8N4S9 558 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 B3GALNT2Q8NCR0 500 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 RAB3IL1Q8TBN0 382 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 TMEM209Q96SK2 561 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 FRMD8P1Q9BZ68 369 aaPredicted RBP15.9■□□□□ 0.14
CXXC1-214ENST00000590901 SNX25Q9H3E2 840 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 SUDS3Q9H7L9 328 aaPredicted RBP15.9■□□□□ 0.14
CXXC1-214ENST00000590901 TIMMDC1Q9NPL8 285 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 MAD1L1Q9Y6D9 718 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 CST8O60676 142 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 SNNO75324 88 aaPredicted RBP15.9■□□□□ 0.14
CXXC1-214ENST00000590901 SPAG6O75602 509 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 PDE5AO76074 875 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 AMHP03971 560 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 SNRPAP09012 282 aaKnown RBP15.9■□□□□ 0.14
CXXC1-214ENST00000590901 RAG1P15918 1043 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 YY1P25490 414 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 LRPAP1P30533 357 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 ZNF143P52747 638 aaPredicted RBP15.9■□□□□ 0.14
CXXC1-214ENST00000590901 SULT2A1Q06520 285 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 HSP90AA5PQ58FG0 334 aa15.9■□□□□ 0.14
CXXC1-214ENST00000590901 RALGPS1Q5JS13 557 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms