RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 CLSTN2Q9H4D0 955 aa8.32□□□□□ -1.08
SMAD4-209ENST00000589941 TTC12Q9H892 705 aaPredicted RBP8.32□□□□□ -1.08
SMAD4-209ENST00000589941 TPCN1Q9ULQ1 816 aa8.32□□□□□ -1.08
SMAD4-209ENST00000589941 GDAQ9Y2T3 454 aa8.32□□□□□ -1.08
SMAD4-209ENST00000589941 TLN1Q9Y490 2541 aaKnown RBP8.32□□□□□ -1.08
SMAD4-209ENST00000589941 MYH10P35580 1976 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 CENPEQ02224 2701 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 TCRBV21S2A2A0A5A6 115 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 TDP2O95551 362 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 GLRA2P23416 452 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 RPS6KB1P23443 525 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 OPRD1P41143 372 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 MC3RP41968 323 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 PLD1Q13393 1074 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 SQSTM1Q13501 440 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 CRYBG3Q68DQ2 2970 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 SARM1Q6SZW1 724 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 GALNT15Q8N3T1 639 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 FANCBQ8NB91 859 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 TXNDC5Q8NBS9 432 aaKnown RBP8.31□□□□□ -1.08
SMAD4-209ENST00000589941 BEST2Q8NFU1 509 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 RDM1Q8NG50 284 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 PTPRN2Q92932 1015 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 ERLEC1Q96DZ1 483 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 JPH2Q9BR39 696 aaPredicted RBP8.31□□□□□ -1.08
SMAD4-209ENST00000589941 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.31□□□□□ -1.08
SMAD4-209ENST00000589941 NUP62CLQ9H1M0 184 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 TASP1Q9H6P5 420 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 ECT2Q9H8V3 914 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 KCND1Q9NSA2 647 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 HSPBP1Q9NZL4 362 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 BCCIPQ9P287 314 aaKnown RBP eCLIP8.31□□□□□ -1.08
SMAD4-209ENST00000589941 PYCARDQ9ULZ3 195 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 COA3Q9Y2R0 106 aaPredicted RBP8.31□□□□□ -1.08
SMAD4-209ENST00000589941 PAXBP1Q9Y5B6 917 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 WNT6Q9Y6F9 365 aa8.31□□□□□ -1.08
SMAD4-209ENST00000589941 KNTC1P50748 2209 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 CCDC69A6NI79 296 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 RRP8O43159 456 aaKnown RBP8.3□□□□□ -1.08
SMAD4-209ENST00000589941 BUB1BO60566 1050 aaPredicted RBP8.3□□□□□ -1.08
SMAD4-209ENST00000589941 KLF8O95600 359 aaPredicted RBP8.3□□□□□ -1.08
SMAD4-209ENST00000589941 ATF6P18850 670 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 ADSSP30520 456 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 CCR10P46092 362 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 SLC6A11P48066 632 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 LINC00310P59036 64 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 PSMC5P62195 406 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 RESTQ13127 1097 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 TOB2Q14106 344 aaPredicted RBP8.3□□□□□ -1.08
SMAD4-209ENST00000589941 KRT32Q14532 448 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 PTPAQ15257 358 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 SPDYCQ5MJ68 293 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 ARHGAP40Q5TG30 622 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 ZNF280DQ6N043 979 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 DNAJB7Q7Z6W7 309 aaPredicted RBP8.3□□□□□ -1.08
SMAD4-209ENST00000589941 TMEM150AQ86TG1 271 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 ERICH1Q86X53 443 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 CMTM8Q8IZV2 173 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 TRIML1Q8N9V2 468 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 IL17RCQ8NAC3 791 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 ZSWIM2Q8NEG5 633 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.3□□□□□ -1.08
SMAD4-209ENST00000589941 ETNPPLQ8TBG4 499 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 SEC14L1Q92503 715 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 PSMG2Q969U7 264 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 ACAP3Q96P50 834 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 THG1LQ9NWX6 298 aaKnown RBP8.3□□□□□ -1.08
SMAD4-209ENST00000589941 CALCOCO1Q9P1Z2 691 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.3□□□□□ -1.08
SMAD4-209ENST00000589941 KIF3AQ9Y496 699 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 CSMD1Q96PZ7 3565 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 KNL1Q8NG31 2342 aa8.3□□□□□ -1.08
SMAD4-209ENST00000589941 COL27A1Q8IZC6 1860 aaPredicted RBP8.3□□□□□ -1.08
SMAD4-209ENST00000589941 IGHV1OR15-9A0A0B4J2B8 117 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 MTMR11A4FU01 709 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 DBX1A6NMT0 343 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 H7C4K7 107 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 PODXLO00592 558 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 SYN3O14994 580 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 BRINP1O60477 761 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 MYF5P13349 255 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 CPA1P15085 419 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 PI3P19957 117 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 GRK2P25098 689 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 GRK3P35626 688 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 DPP6P42658 865 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 DMTNQ08495 405 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 SLC9A5Q14940 896 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 PCBP1Q15365 356 aaKnown RBP eCLIP8.29□□□□□ -1.08
SMAD4-209ENST00000589941 ARHGAP15Q53QZ3 475 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 ZC3H12BQ5HYM0 836 aaKnown RBP8.29□□□□□ -1.08
SMAD4-209ENST00000589941 EMC10Q5UCC4 262 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 LMBRD2Q68DH5 695 aaPredicted RBP8.29□□□□□ -1.08
SMAD4-209ENST00000589941 ATL3Q6DD88 541 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 MAMDC2Q7Z304 686 aaPredicted RBP8.29□□□□□ -1.08
SMAD4-209ENST00000589941 CPA6Q8N4T0 437 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 MAB21L3Q8N8X9 362 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 LEO1Q8WVC0 666 aaPredicted RBP8.29□□□□□ -1.08
SMAD4-209ENST00000589941 TCP11Q8WWU5 503 aa8.29□□□□□ -1.08
SMAD4-209ENST00000589941 C18orf25Q96B23 403 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms