RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 REV3LO60673 3130 aa17.89■□□□□ 0.46
CXXC1-212ENST00000589940 C5orf60A6NFR6 353 aa17.89■□□□□ 0.45
CXXC1-212ENST00000589940 DNALI1O14645 258 aaPredicted RBP17.89■□□□□ 0.45
CXXC1-212ENST00000589940 SCAMP3O14828 347 aaKnown RBP17.89■□□□□ 0.45
CXXC1-212ENST00000589940 TP73O15350 636 aa17.89■□□□□ 0.45
CXXC1-212ENST00000589940 GCATO75600 419 aa17.89■□□□□ 0.45
CXXC1-212ENST00000589940 TTC39BQ5VTQ0 682 aaPredicted RBP17.89■□□□□ 0.45
CXXC1-212ENST00000589940 IZUMO3Q5VZ72 239 aa17.89■□□□□ 0.45
CXXC1-212ENST00000589940 LRRC49Q8IUZ0 686 aa17.89■□□□□ 0.45
CXXC1-212ENST00000589940 FAM217AQ8IXS0 508 aa17.89■□□□□ 0.45
CXXC1-212ENST00000589940 ATPAF2Q8N5M1 289 aa17.89■□□□□ 0.45
CXXC1-212ENST00000589940 TTC16Q8NEE8 873 aa17.89■□□□□ 0.45
CXXC1-212ENST00000589940 SH3RF2Q8TEC5 729 aa17.89■□□□□ 0.45
CXXC1-212ENST00000589940 NOL6Q9H6R4 1146 aaKnown RBP17.89■□□□□ 0.45
CXXC1-212ENST00000589940 TDP1Q9NUW8 608 aa17.89■□□□□ 0.45
CXXC1-212ENST00000589940 LMCD1Q9NZU5 365 aa17.89■□□□□ 0.45
CXXC1-212ENST00000589940 CCL26Q9Y258 94 aa17.89■□□□□ 0.45
CXXC1-212ENST00000589940 A0A1W2PPC1 479 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 TRDMT1O14717 391 aaKnown RBP17.88■□□□□ 0.45
CXXC1-212ENST00000589940 STK10O94804 968 aaKnown RBP17.88■□□□□ 0.45
CXXC1-212ENST00000589940 OR1E1P30953 314 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 ITGA8P53708 1063 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 CDH4P55283 916 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 RPS24P62847 133 aaKnown RBP17.88■□□□□ 0.45
CXXC1-212ENST00000589940 CAV1Q03135 178 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 RARS2Q5T160 578 aaKnown RBP17.88■□□□□ 0.45
CXXC1-212ENST00000589940 ITFG1Q8TB96 612 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 ING5Q8WYH8 240 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 USP13Q92995 863 aaPredicted RBP17.88■□□□□ 0.45
CXXC1-212ENST00000589940 TSGA13Q96PP4 275 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 FMO2Q99518 471 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 ADAM7Q9H2U9 754 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 TPX2Q9ULW0 747 aaKnown RBP17.88■□□□□ 0.45
CXXC1-212ENST00000589940 SZT2Q5T011 3432 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.88■□□□□ 0.45
CXXC1-212ENST00000589940 RNF103O00237 685 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 GFRA2O00451 464 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 NDC80O14777 642 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 MTSS1O43312 755 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 CLDN11O75508 207 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 C4orf22Q6V702 233 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 CHST9Q7L1S5 443 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 CCDC13Q8IYE1 715 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 CCDC110Q8TBZ0 833 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 CAVIN3Q969G5 261 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 ANAPC5Q9UJX4 755 aa17.88■□□□□ 0.45
CXXC1-212ENST00000589940 A0A0A0MRY4 1105 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 A0A1B0GVM2 712 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 E2F8A0AVK6 867 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 TCAF2A6NFQ2 919 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 LINC01565O15544 149 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 TSPAN3O60637 253 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 RAMP2O60895 175 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 FAM153BP0C7A2 387 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 CCNCP24863 283 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 SGSHP51688 502 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 FAM153CQ494X1 144 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 GPR149Q86SP6 731 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 BBS7Q8IWZ6 715 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 DEPDC1BQ8WUY9 529 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 ZSWIM3Q96MP5 696 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 SPATA13Q96N96 652 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 SEPT10Q9P0V9 454 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 MTRF1LQ9UGC7 380 aaKnown RBP17.87■□□□□ 0.45
CXXC1-212ENST00000589940 FAM153AQ9UHL3 310 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 NUP205Q92621 2012 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 KCNK1O00180 336 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 PRAMEF12O95522 483 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 PAPOLAP51003 745 aaKnown RBP17.87■□□□□ 0.45
CXXC1-212ENST00000589940 WASHC5Q12768 1159 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 PARP15Q460N3 678 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 HIBCHQ6NVY1 386 aaPredicted RBP17.87■□□□□ 0.45
CXXC1-212ENST00000589940 ANKRD54Q6NXT1 300 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 RHBDF2Q6PJF5 856 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 ARHGAP36Q6ZRI8 547 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 PCGF5Q86SE9 256 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 CPXM2Q8N436 756 aa17.87■□□□□ 0.45
CXXC1-212ENST00000589940 HJURPQ8NCD3 748 aaPredicted RBP17.87■□□□□ 0.45
CXXC1-212ENST00000589940 HELZP42694 1942 aaKnown RBP17.87■□□□□ 0.45
CXXC1-212ENST00000589940 ARHGAP42A6NI28 874 aa17.86■□□□□ 0.45
CXXC1-212ENST00000589940 RASA4BC9J798 803 aa17.86■□□□□ 0.45
CXXC1-212ENST00000589940 RASA4O43374 803 aa17.86■□□□□ 0.45
CXXC1-212ENST00000589940 MAFKO60675 156 aa17.86■□□□□ 0.45
CXXC1-212ENST00000589940 OPHN1O60890 802 aa17.86■□□□□ 0.45
CXXC1-212ENST00000589940 CHKAP35790 457 aa17.86■□□□□ 0.45
CXXC1-212ENST00000589940 YBEYP58557 167 aaPredicted RBP17.86■□□□□ 0.45
CXXC1-212ENST00000589940 CBX2Q14781 532 aaPredicted RBP17.86■□□□□ 0.45
CXXC1-212ENST00000589940 MORF4L2Q15014 288 aa17.86■□□□□ 0.45
CXXC1-212ENST00000589940 ANKRD20A2Q5SQ80 823 aa17.86■□□□□ 0.45
CXXC1-212ENST00000589940 RNASEH2BQ5TBB1 312 aaKnown RBP17.86■□□□□ 0.45
CXXC1-212ENST00000589940 ANKRD20A1Q5TYW2 823 aa17.86■□□□□ 0.45
CXXC1-212ENST00000589940 ANKRD20A3Q5VUR7 823 aa17.86■□□□□ 0.45
CXXC1-212ENST00000589940 SYCE2Q6PIF2 218 aa17.86■□□□□ 0.45
CXXC1-212ENST00000589940 POTEHQ6S545 545 aa17.86■□□□□ 0.45
CXXC1-212ENST00000589940 ARHGEF18Q6ZSZ5 1173 aa17.86■□□□□ 0.45
CXXC1-212ENST00000589940 HMCESQ96FZ2 354 aa17.86■□□□□ 0.45
CXXC1-212ENST00000589940 GDAP1L1Q96MZ0 367 aa17.86■□□□□ 0.45
CXXC1-212ENST00000589940 FARP1Q9Y4F1 1045 aaPredicted RBP17.86■□□□□ 0.45
CXXC1-212ENST00000589940 TMEM265A0A087WTH1 108 aa17.86■□□□□ 0.45
CXXC1-212ENST00000589940 TYW5A2RUC4 315 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms