RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 C5AR1P21730 350 aa19.03■□□□□ 0.64
CCDC43-204ENST00000588687 ELAVL3Q14576 367 aaKnown RBP19.03■□□□□ 0.64
CCDC43-204ENST00000588687 MEA1Q16626 185 aa19.03■□□□□ 0.64
CCDC43-204ENST00000588687 RAP1GAP2Q684P5 730 aa19.03■□□□□ 0.64
CCDC43-204ENST00000588687 DENND1BQ6P3S1 775 aa19.03■□□□□ 0.64
CCDC43-204ENST00000588687 LGI2Q8N0V4 545 aa19.03■□□□□ 0.64
CCDC43-204ENST00000588687 FAM149B1Q96BN6 582 aa19.03■□□□□ 0.64
CCDC43-204ENST00000588687 CNDP2Q96KP4 475 aaKnown RBP19.03■□□□□ 0.64
CCDC43-204ENST00000588687 RPL10LQ96L21 214 aaKnown RBP19.03■□□□□ 0.64
CCDC43-204ENST00000588687 OMDQ99983 421 aa19.03■□□□□ 0.64
CCDC43-204ENST00000588687 SLC4A5Q9BY07 1137 aa19.03■□□□□ 0.64
CCDC43-204ENST00000588687 AASDHPPTQ9NRN7 309 aa19.03■□□□□ 0.64
CCDC43-204ENST00000588687 ARHGAP20Q9P2F6 1191 aa19.03■□□□□ 0.64
CCDC43-204ENST00000588687 YKT6O15498 198 aa19.02■□□□□ 0.64
CCDC43-204ENST00000588687 SART1O43290 800 aaKnown RBP19.02■□□□□ 0.64
CCDC43-204ENST00000588687 TACR2P21452 398 aa19.02■□□□□ 0.64
CCDC43-204ENST00000588687 BMP6P22004 513 aa19.02■□□□□ 0.64
CCDC43-204ENST00000588687 SFSWAPQ12872 951 aaKnown RBP19.02■□□□□ 0.64
CCDC43-204ENST00000588687 ZC3H12AQ5D1E8 599 aaKnown RBP19.02■□□□□ 0.64
CCDC43-204ENST00000588687 CXorf57Q6NSI4 855 aaKnown RBP19.02■□□□□ 0.64
CCDC43-204ENST00000588687 FBXL19Q6PCT2 694 aa19.02■□□□□ 0.64
CCDC43-204ENST00000588687 SND1Q7KZF4 910 aaKnown RBP eCLIP19.02■□□□□ 0.64
CCDC43-204ENST00000588687 CHSY1Q86X52 802 aa19.02■□□□□ 0.64
CCDC43-204ENST00000588687 CIR1Q86X95 450 aaPredicted RBP19.02■□□□□ 0.64
CCDC43-204ENST00000588687 SPATS2Q86XZ4 545 aaKnown RBP19.02■□□□□ 0.64
CCDC43-204ENST00000588687 STK32AQ8WU08 396 aa19.02■□□□□ 0.64
CCDC43-204ENST00000588687 SMARCE1Q969G3 411 aa19.02■□□□□ 0.64
CCDC43-204ENST00000588687 NXPE2Q96DL1 559 aa19.02■□□□□ 0.64
CCDC43-204ENST00000588687 ERVMER34-1Q9H9K5 563 aa19.02■□□□□ 0.64
CCDC43-204ENST00000588687 GDF3Q9NR23 364 aa19.02■□□□□ 0.64
CCDC43-204ENST00000588687 E5RJQ4 531 aa19.01■□□□□ 0.63
CCDC43-204ENST00000588687 PSMA7O14818 248 aa19.01■□□□□ 0.63
CCDC43-204ENST00000588687 TLX3O43711 291 aaPredicted RBP19.01■□□□□ 0.63
CCDC43-204ENST00000588687 C1SP09871 688 aa19.01■□□□□ 0.63
CCDC43-204ENST00000588687 RXRGP48443 463 aa19.01■□□□□ 0.63
CCDC43-204ENST00000588687 NUMBP49757 651 aa19.01■□□□□ 0.63
CCDC43-204ENST00000588687 NAPEPLDQ6IQ20 393 aa19.01■□□□□ 0.63
CCDC43-204ENST00000588687 FOXR2Q6PJQ5 311 aa19.01■□□□□ 0.63
CCDC43-204ENST00000588687 TMEM110Q86TL2 294 aa19.01■□□□□ 0.63
CCDC43-204ENST00000588687 TRIM59Q8IWR1 403 aa19.01■□□□□ 0.63
CCDC43-204ENST00000588687 OR14C36Q8NHC7 312 aa19.01■□□□□ 0.63
CCDC43-204ENST00000588687 ALG14Q96F25 216 aa19.01■□□□□ 0.63
CCDC43-204ENST00000588687 DHTKD1Q96HY7 919 aaPredicted RBP19.01■□□□□ 0.63
CCDC43-204ENST00000588687 SERAC1Q96JX3 654 aa19.01■□□□□ 0.63
CCDC43-204ENST00000588687 BTN2A3PQ96KV6 586 aa19.01■□□□□ 0.63
CCDC43-204ENST00000588687 TJP2Q9UDY2 1190 aa19.01■□□□□ 0.63
CCDC43-204ENST00000588687 TPX2Q9ULW0 747 aaKnown RBP19.01■□□□□ 0.63
CCDC43-204ENST00000588687 TLR4O00206 839 aa19■□□□□ 0.63
CCDC43-204ENST00000588687 SMC2O95347 1197 aa19■□□□□ 0.63
CCDC43-204ENST00000588687 MOCS3O95396 460 aa19■□□□□ 0.63
CCDC43-204ENST00000588687 LDOC1O95751 146 aaPredicted RBP19■□□□□ 0.63
CCDC43-204ENST00000588687 TRUB2O95900 331 aaKnown RBP19■□□□□ 0.63
CCDC43-204ENST00000588687 APOEP02649 317 aa19■□□□□ 0.63
CCDC43-204ENST00000588687 ITGAVP06756 1048 aa19■□□□□ 0.63
CCDC43-204ENST00000588687 ABCB4P21439 1286 aa19■□□□□ 0.63
CCDC43-204ENST00000588687 ACADSBP45954 432 aa19■□□□□ 0.63
CCDC43-204ENST00000588687 VASPP50552 380 aaPredicted RBP19■□□□□ 0.63
CCDC43-204ENST00000588687 PLK1P53350 603 aa19■□□□□ 0.63
CCDC43-204ENST00000588687 BNIP3Q12983 259 aa19■□□□□ 0.63
CCDC43-204ENST00000588687 AGBL4Q5VU57 503 aa19■□□□□ 0.63
CCDC43-204ENST00000588687 CCAR2Q8N163 923 aaKnown RBP19■□□□□ 0.63
CCDC43-204ENST00000588687 EID2Q8N6I1 236 aa19■□□□□ 0.63
CCDC43-204ENST00000588687 OR52K2Q8NGK3 314 aa19■□□□□ 0.63
CCDC43-204ENST00000588687 SKA1Q96BD8 255 aa19■□□□□ 0.63
CCDC43-204ENST00000588687 SPAG5Q96R06 1193 aa19■□□□□ 0.63
CCDC43-204ENST00000588687 GTPBP4Q9BZE4 634 aaKnown RBP19■□□□□ 0.63
CCDC43-204ENST00000588687 POPDC2Q9HBU9 364 aa19■□□□□ 0.63
CCDC43-204ENST00000588687 ST7Q9NRC1 585 aa19■□□□□ 0.63
CCDC43-204ENST00000588687 MAN1B1Q9UKM7 699 aa19■□□□□ 0.63
CCDC43-204ENST00000588687 SARDHQ9UL12 918 aa19■□□□□ 0.63
CCDC43-204ENST00000588687 KCNU1A8MYU2 1149 aa18.99■□□□□ 0.63
CCDC43-204ENST00000588687 PLRG1O43660 514 aaKnown RBP18.99■□□□□ 0.63
CCDC43-204ENST00000588687 IL1BP01584 269 aa18.99■□□□□ 0.63
CCDC43-204ENST00000588687 PDGFRAP16234 1089 aa18.99■□□□□ 0.63
CCDC43-204ENST00000588687 ITPKBP27987 946 aa18.99■□□□□ 0.63
CCDC43-204ENST00000588687 HNF1BP35680 557 aa18.99■□□□□ 0.63
CCDC43-204ENST00000588687 ABCG1P45844 678 aa18.99■□□□□ 0.63
CCDC43-204ENST00000588687 ARRB1P49407 418 aaPredicted RBP18.99■□□□□ 0.63
CCDC43-204ENST00000588687 IRAK1P51617 712 aa18.99■□□□□ 0.63
CCDC43-204ENST00000588687 MARSP56192 900 aaKnown RBP18.99■□□□□ 0.63
CCDC43-204ENST00000588687 SLC12A1Q13621 1099 aa18.99■□□□□ 0.63
CCDC43-204ENST00000588687 TAF5Q15542 800 aa18.99■□□□□ 0.63
CCDC43-204ENST00000588687 CCDC40Q4G0X9 1142 aa18.99■□□□□ 0.63
CCDC43-204ENST00000588687 HES3Q5TGS1 186 aa18.99■□□□□ 0.63
CCDC43-204ENST00000588687 MFSD2AQ8NA29 543 aa18.99■□□□□ 0.63
CCDC43-204ENST00000588687 EHBP1Q8NDI1 1231 aa18.99■□□□□ 0.63
CCDC43-204ENST00000588687 TIGD1Q96MW7 591 aa18.99■□□□□ 0.63
CCDC43-204ENST00000588687 TRIM62Q9BVG3 475 aa18.99■□□□□ 0.63
CCDC43-204ENST00000588687 ACP6Q9NPH0 428 aa18.99■□□□□ 0.63
CCDC43-204ENST00000588687 CEP83Q9Y592 693 aa18.99■□□□□ 0.63
CCDC43-204ENST00000588687 A0A1B0GVM2 712 aa18.98■□□□□ 0.63
CCDC43-204ENST00000588687 TCAF2A6NFQ2 919 aa18.98■□□□□ 0.63
CCDC43-204ENST00000588687 PPP1R3GB7ZBB8 358 aa18.98■□□□□ 0.63
CCDC43-204ENST00000588687 F5H5T6 163 aa18.98■□□□□ 0.63
CCDC43-204ENST00000588687 SLC7A4O43246 635 aa18.98■□□□□ 0.63
CCDC43-204ENST00000588687 RTN2O75298 545 aa18.98■□□□□ 0.63
CCDC43-204ENST00000588687 CDK4P11802 303 aa18.98■□□□□ 0.63
CCDC43-204ENST00000588687 EIF2S3P41091 472 aaKnown RBP18.98■□□□□ 0.63
CCDC43-204ENST00000588687 YWHAZP63104 245 aaKnown RBP18.98■□□□□ 0.63
CCDC43-204ENST00000588687 CENPCQ03188 943 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms