RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 CDCA3Q99618 268 aaPredicted RBP26.7■■□□□ 1.86
SCAMP4-210ENST00000588555 A0A0A0MRY4 1105 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 DFFAO00273 331 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 ARHGAP36Q6ZRI8 547 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 CFAP52Q8N1V2 620 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 TSEN2Q8NCE0 465 aaKnown RBP26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 ZSCAN18Q8TBC5 510 aaPredicted RBP26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 SPATA13Q96N96 652 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 RETREG1Q9H6L5 497 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 TASP1Q9H6P5 420 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 ARHGAP26Q9UNA1 814 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 SHOC2Q9UQ13 582 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 ZFP37Q9Y6Q3 630 aaPredicted RBP26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 SOBPA7XYQ1 873 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 KCNK1O00180 336 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 GFRA2O00451 464 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 ATP8B1O43520 1251 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 MAPKAPK2P49137 400 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 SGSHP51688 502 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 RABGAP1LQ5R372 815 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 ANKRD20A2Q5SQ80 823 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 ANKRD20A1Q5TYW2 823 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 ANKRD20A3Q5VUR7 823 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 ANKRD22Q5VYY1 191 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 C4orf22Q6V702 233 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 PCGF5Q86SE9 256 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 FAM217AQ8IXS0 508 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 PPIL6Q8IXY8 311 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 CCDC13Q8IYE1 715 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 CMTM8Q8IZV2 173 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 TAB3Q8N5C8 712 aaPredicted RBP26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 C12orf76Q8N812 135 aaPredicted RBP26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 NAT8LQ8N9F0 302 aa26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 PRCCQ92733 491 aaPredicted RBP26.69■■□□□ 1.86
SCAMP4-210ENST00000588555 SHROOM3Q8TF72 1996 aa26.68■■□□□ 1.86
SCAMP4-210ENST00000588555 SPDYE4A6NLX3 237 aa26.68■■□□□ 1.86
SCAMP4-210ENST00000588555 TRDMT1O14717 391 aaKnown RBP26.68■■□□□ 1.86
SCAMP4-210ENST00000588555 NDC80O14777 642 aa26.68■■□□□ 1.86
SCAMP4-210ENST00000588555 MAFKO60675 156 aa26.68■■□□□ 1.86
SCAMP4-210ENST00000588555 PPFIA2O75334 1257 aa26.68■■□□□ 1.86
SCAMP4-210ENST00000588555 CHKAP35790 457 aa26.68■■□□□ 1.86
SCAMP4-210ENST00000588555 RPS24P62847 133 aaKnown RBP26.68■■□□□ 1.86
SCAMP4-210ENST00000588555 ARHGAP15Q53QZ3 475 aa26.68■■□□□ 1.86
SCAMP4-210ENST00000588555 HTR3DQ70Z44 454 aa26.68■■□□□ 1.86
SCAMP4-210ENST00000588555 ATPAF2Q8N5M1 289 aa26.68■■□□□ 1.86
SCAMP4-210ENST00000588555 DDX50Q9BQ39 737 aaKnown RBP26.68■■□□□ 1.86
SCAMP4-210ENST00000588555 FERMT1Q9BQL6 677 aa26.68■■□□□ 1.86
SCAMP4-210ENST00000588555 CFAP97Q9P2B7 532 aa26.68■■□□□ 1.86
SCAMP4-210ENST00000588555 MYO9BQ13459 2157 aa26.68■■□□□ 1.86
SCAMP4-210ENST00000588555 SCAMP3O14828 347 aaKnown RBP26.67■■□□□ 1.86
SCAMP4-210ENST00000588555 MTSS1O43312 755 aa26.67■■□□□ 1.86
SCAMP4-210ENST00000588555 METTL18O95568 372 aa26.67■■□□□ 1.86
SCAMP4-210ENST00000588555 CCNCP24863 283 aa26.67■■□□□ 1.86
SCAMP4-210ENST00000588555 PTPN3P26045 913 aa26.67■■□□□ 1.86
SCAMP4-210ENST00000588555 PAPOLAP51003 745 aaKnown RBP26.67■■□□□ 1.86
SCAMP4-210ENST00000588555 DHX9Q08211 1270 aaKnown RBP26.67■■□□□ 1.86
SCAMP4-210ENST00000588555 HOOK3Q86VS8 718 aa26.67■■□□□ 1.86
SCAMP4-210ENST00000588555 LRRC49Q8IUZ0 686 aa26.67■■□□□ 1.86
SCAMP4-210ENST00000588555 ZNF567Q8N184 647 aa26.67■■□□□ 1.86
SCAMP4-210ENST00000588555 SMG7Q92540 1137 aaKnown RBP26.67■■□□□ 1.86
SCAMP4-210ENST00000588555 CEP41Q9BYV8 373 aa26.67■■□□□ 1.86
SCAMP4-210ENST00000588555 SMG9Q9H0W8 520 aaKnown RBP26.67■■□□□ 1.86
SCAMP4-210ENST00000588555 RAB6BQ9NRW1 208 aa26.67■■□□□ 1.86
SCAMP4-210ENST00000588555 SEPT10Q9P0V9 454 aa26.67■■□□□ 1.86
SCAMP4-210ENST00000588555 CHD5Q8TDI0 1954 aa26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 LEFTY2O00292 366 aa26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 OPHN1O60890 802 aa26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 STK10O94804 968 aaKnown RBP26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 CDH4P55283 916 aa26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 BASP1P80723 227 aaKnown RBP26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 KCNJ11Q14654 390 aa26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 POTEHQ6S545 545 aa26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 ZCCHC9Q8N567 271 aaKnown RBP26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 PWWP2AQ96N64 755 aa26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 SFXN1Q9H9B4 322 aa26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 CCL26Q9Y258 94 aa26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 TCRBV7S3A2A0A539 114 aa26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 RASA4BC9J798 803 aa26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 RASA4O43374 803 aa26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 TMEM63AO94886 807 aa26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 OR1E1P30953 314 aa26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 MAGEA6P43360 314 aa26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 ZBTB17Q13105 803 aa26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 TMC5Q6UXY8 1006 aa26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 ARHGEF18Q6ZSZ5 1173 aa26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 HMCESQ96FZ2 354 aa26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 LSM7Q9UK45 103 aaKnown RBP26.66■■□□□ 1.86
SCAMP4-210ENST00000588555 SZT2Q5T011 3432 aa26.65■■□□□ 1.86
SCAMP4-210ENST00000588555 C2orf16Q68DN1 1984 aa26.65■■□□□ 1.86
SCAMP4-210ENST00000588555 ZNF197O14709 1029 aa26.65■■□□□ 1.86
SCAMP4-210ENST00000588555 GLP2RO95838 553 aa26.65■■□□□ 1.86
SCAMP4-210ENST00000588555 AVPR1AP37288 418 aa26.65■■□□□ 1.86
SCAMP4-210ENST00000588555 CHST9Q7L1S5 443 aa26.65■■□□□ 1.86
SCAMP4-210ENST00000588555 FOXP3Q9BZS1 431 aa26.65■■□□□ 1.86
SCAMP4-210ENST00000588555 ETNK1Q9HBU6 452 aa26.65■■□□□ 1.86
SCAMP4-210ENST00000588555 HPCAL4Q9UM19 191 aa26.65■■□□□ 1.86
SCAMP4-210ENST00000588555 CHADO15335 359 aa26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 TSPAN3O60637 253 aa26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 RAMP2O60895 175 aa26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 CLDN11O75508 207 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms