RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 TUBGCP2Q9BSJ2 902 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 SYNCQ9H7C4 482 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 EBF2Q9HAK2 575 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 RALYQ9UKM9 306 aaKnown RBP14.79□□□□□ -0.04
VMP1-206ENST00000587945 VANGL2Q9ULK5 521 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 SCML1Q9UN30 329 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 BTBD3Q9Y2F9 522 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 HS3ST4Q9Y661 456 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 NUMA1Q14980 2115 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 ITIH6Q6UXX5 1313 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 A0A1B0GVM2 712 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 TCAF2A6NFQ2 919 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 M0QYT0 321 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 PES1O00541 588 aaKnown RBP14.78□□□□□ -0.04
VMP1-206ENST00000587945 PAGE1O75459 146 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 DAB1O75553 588 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 ZNF883P0CG24 379 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 TFE3P19532 575 aaPredicted RBP14.78□□□□□ -0.04
VMP1-206ENST00000587945 GRIA4P48058 902 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 RNASE9P60153 205 aaKnown RBP14.78□□□□□ -0.04
VMP1-206ENST00000587945 KCNMA1Q12791 1236 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 RAPGEF1Q13905 1077 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 DRAP1Q14919 205 aaPredicted RBP14.78□□□□□ -0.04
VMP1-206ENST00000587945 RABGAP1LQ5R372 815 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 OTUD1Q5VV17 481 aaPredicted RBP14.78□□□□□ -0.04
VMP1-206ENST00000587945 SLC26A9Q7LBE3 791 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 ADAT2Q7Z6V5 191 aaKnown RBP14.78□□□□□ -0.04
VMP1-206ENST00000587945 FAM114A1Q8IWE2 563 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 RHBDD1Q8TEB9 315 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 ALG14Q96F25 216 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 SIK2Q9H0K1 926 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 OSGEPQ9NPF4 335 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 SNX10Q9Y5X0 201 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 FHOD1Q9Y613 1164 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 CFAP47Q6ZTR5 3102 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 CEP192Q8TEP8 1941 aa14.78□□□□□ -0.04
VMP1-206ENST00000587945 SPEGQ15772 3267 aa14.77□□□□□ -0.04
VMP1-206ENST00000587945 H0Y8X5 98 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 PLK4O00444 970 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 ADCY5O95622 1261 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 IL1BP01584 269 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 NOS2P35228 1153 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 METAP1P53582 386 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 IL9RQ01113 521 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 SLC12A1Q13621 1099 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 KCNJ12Q14500 433 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 PRAMEF14Q5SWL7 426 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 TTC39BQ5VTQ0 682 aaPredicted RBP14.77□□□□□ -0.05
VMP1-206ENST00000587945 TAF3Q5VWG9 929 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 DBX2Q6ZNG2 339 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 OR2T34Q8NGX1 318 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 OR14C36Q8NHC7 312 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 FRS2Q8WU20 508 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 ADAMTS14Q8WXS8 1223 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 ZCCHC14Q8WYQ9 949 aaKnown RBP14.77□□□□□ -0.05
VMP1-206ENST00000587945 PDCL3Q9H2J4 239 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 ANLNQ9NQW6 1124 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 SAMSN1Q9NSI8 373 aaKnown RBP14.77□□□□□ -0.05
VMP1-206ENST00000587945 PIGVQ9NUD9 493 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 ADAMTS1Q9UHI8 967 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 PCDHGB2Q9Y5G2 931 aa14.77□□□□□ -0.05
VMP1-206ENST00000587945 IGF2RP11717 2491 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.76□□□□□ -0.05
VMP1-206ENST00000587945 A0A1W2PPC4 97 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 LRRC72A6NJI9 287 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 GOLGA8CPA6NN73 597 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 I6L893 689 aaPredicted RBP14.76□□□□□ -0.05
VMP1-206ENST00000587945 WNT9AO14904 365 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 CNTN5O94779 1100 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 WNT1P04628 370 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 ATXN1LP0C7T5 689 aaKnown RBP14.76□□□□□ -0.05
VMP1-206ENST00000587945 CYP11B1P15538 503 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 GOT1P17174 413 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 C5AR1P21730 350 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 ERCC5P28715 1186 aaPredicted RBP14.76□□□□□ -0.05
VMP1-206ENST00000587945 NNMTP40261 264 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 CTSKP43235 329 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 SULT1E1P49888 294 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 PLK1P53350 603 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 ADPRHP54922 357 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 BPIFB4P59827 614 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 RACK1P63244 317 aaKnown RBP14.76□□□□□ -0.05
VMP1-206ENST00000587945 SULT2A1Q06520 285 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 SFSWAPQ12872 951 aaKnown RBP14.76□□□□□ -0.05
VMP1-206ENST00000587945 ZNF177Q13360 481 aaPredicted RBP14.76□□□□□ -0.05
VMP1-206ENST00000587945 ELAVL3Q14576 367 aaKnown RBP14.76□□□□□ -0.05
VMP1-206ENST00000587945 POM121L1PQ3SYA9 428 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 ACCSLQ4AC99 568 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 C2CD6Q53TS8 623 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 KLHDC7AQ5VTJ3 777 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.76□□□□□ -0.05
VMP1-206ENST00000587945 GLRX5Q86SX6 157 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 ZNF397Q8NF99 534 aaPredicted RBP14.76□□□□□ -0.05
VMP1-206ENST00000587945 BAHD1Q8TBE0 780 aaPredicted RBP14.76□□□□□ -0.05
VMP1-206ENST00000587945 NPY6RQ99463 290 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 FEM1AQ9BSK4 669 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 NUP62CLQ9H1M0 184 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 TMPRSS4Q9NRS4 437 aa14.76□□□□□ -0.05
VMP1-206ENST00000587945 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.76□□□□□ -0.05
VMP1-206ENST00000587945 SARDHQ9UL12 918 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms