RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 TBXAS1P24557 533 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-225ENST00000586385 HNF1BP35680 557 aa12.28□□□□□ -0.44
BRCA1-225ENST00000586385 FMO5P49326 533 aa12.28□□□□□ -0.44
BRCA1-225ENST00000586385 YWHAEP62258 255 aaKnown RBP12.28□□□□□ -0.44
BRCA1-225ENST00000586385 KRT85P78386 507 aa12.28□□□□□ -0.44
BRCA1-225ENST00000586385 INSM1Q01101 510 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-225ENST00000586385 COBLL1Q53SF7 1204 aa12.28□□□□□ -0.44
BRCA1-225ENST00000586385 ZC3H12AQ5D1E8 599 aaKnown RBP12.28□□□□□ -0.44
BRCA1-225ENST00000586385 RAP1GAP2Q684P5 730 aa12.28□□□□□ -0.44
BRCA1-225ENST00000586385 NAPEPLDQ6IQ20 393 aa12.28□□□□□ -0.44
BRCA1-225ENST00000586385 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-225ENST00000586385 SND1Q7KZF4 910 aaKnown RBP eCLIP12.28□□□□□ -0.44
BRCA1-225ENST00000586385 CIR1Q86X95 450 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-225ENST00000586385 ARHGEF19Q8IW93 802 aa12.28□□□□□ -0.44
BRCA1-225ENST00000586385 HSCBQ8IWL3 235 aa12.28□□□□□ -0.44
BRCA1-225ENST00000586385 LGI2Q8N0V4 545 aa12.28□□□□□ -0.44
BRCA1-225ENST00000586385 MFSD2AQ8NA29 543 aa12.28□□□□□ -0.44
BRCA1-225ENST00000586385 OR52K2Q8NGK3 314 aa12.28□□□□□ -0.44
BRCA1-225ENST00000586385 ERCC4Q92889 916 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-225ENST00000586385 ALG14Q96F25 216 aa12.28□□□□□ -0.44
BRCA1-225ENST00000586385 PRMT1Q99873 361 aaKnown RBP12.28□□□□□ -0.44
BRCA1-225ENST00000586385 CYTH4Q9UIA0 394 aa12.28□□□□□ -0.44
BRCA1-225ENST00000586385 CA5BQ9Y2D0 317 aa12.28□□□□□ -0.44
BRCA1-225ENST00000586385 PCDHB4Q9Y5E5 795 aa12.28□□□□□ -0.44
BRCA1-225ENST00000586385 ASH1LQ9NR48 2969 aaKnown RBP12.28□□□□□ -0.44
BRCA1-225ENST00000586385 CFAP46Q8IYW2 2715 aa12.28□□□□□ -0.44
BRCA1-225ENST00000586385 TK2O00142 265 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 PMM2O15305 246 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 SDC3O75056 442 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 FBXO21O94952 628 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 ADH1BP00325 375 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 GIMD1P0DJR0 217 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 CDK4P11802 303 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 CKMT2P17540 419 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 TACR2P21452 398 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 GPD2P43304 727 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 ARRB1P49407 418 aaPredicted RBP12.27□□□□□ -0.45
BRCA1-225ENST00000586385 IRAK1P51617 712 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 FKBP3Q00688 224 aaKnown RBP12.27□□□□□ -0.45
BRCA1-225ENST00000586385 TLE3Q04726 772 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 ELAVL3Q14576 367 aaKnown RBP12.27□□□□□ -0.45
BRCA1-225ENST00000586385 AGBL4Q5VU57 503 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 CXorf57Q6NSI4 855 aaKnown RBP12.27□□□□□ -0.45
BRCA1-225ENST00000586385 DENND1BQ6P3S1 775 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 ERICH1Q86X53 443 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 SLC25A45Q8N413 288 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 DCBLD1Q8N8Z6 715 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 SKA1Q96BD8 255 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 KREMEN1Q96MU8 473 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 SERPINB11Q96P15 392 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 DDX50Q9BQ39 737 aaKnown RBP12.27□□□□□ -0.45
BRCA1-225ENST00000586385 GDPD2Q9HCC8 539 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 TJP2Q9UDY2 1190 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 ARMCX3Q9UH62 379 aaPredicted RBP12.27□□□□□ -0.45
BRCA1-225ENST00000586385 AK5Q9Y6K8 562 aa12.27□□□□□ -0.45
BRCA1-225ENST00000586385 TP53BP1Q12888 1972 aaPredicted RBP12.27□□□□□ -0.45
BRCA1-225ENST00000586385 ZNF462Q96JM2 2506 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 TBC1D3DA0A087WVF3 549 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 TBC1D3IA0A087WXS9 549 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 TBC1D3EA0A087X179 549 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 TBC1D3KA0A087X1G2 549 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 TBC1D3FA6NER0 549 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-225ENST00000586385 TBC1D3LB9A6J9 549 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 RNF103O00237 685 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 PLRG1O43660 514 aaKnown RBP12.26□□□□□ -0.45
BRCA1-225ENST00000586385 SIGLEC6O43699 453 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 IL1BP01584 269 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 CENPBP07199 599 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-225ENST00000586385 HSP90AA1P07900 732 aaKnown RBP12.26□□□□□ -0.45
BRCA1-225ENST00000586385 TBC1D3HP0C7X1 549 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 PDGFRAP16234 1089 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 ACP1P24666 158 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 MAT2AP31153 395 aaKnown RBP12.26□□□□□ -0.45
BRCA1-225ENST00000586385 TAS2R38P59533 333 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 C19orf57Q0VDD7 668 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 SFSWAPQ12872 951 aaKnown RBP12.26□□□□□ -0.45
BRCA1-225ENST00000586385 ILKQ13418 452 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 TAF5Q15542 800 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 ZNF658Q5TYW1 1059 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-225ENST00000586385 TBC1D3GQ6DHY5 549 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 TBC1D3CQ6IPX1 549 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 BEND5Q7L4P6 421 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 RRAGAQ7L523 313 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 CHSY1Q86X52 802 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 TBC1D3Q8IZP1 549 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-225ENST00000586385 CCAR2Q8N163 923 aaKnown RBP12.26□□□□□ -0.45
BRCA1-225ENST00000586385 CACTIN-AS1Q8N1I8 211 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 ZNF843Q8N446 348 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 SPATA20Q8TB22 786 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 NT5C1BQ96P26 610 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 FCRL3Q96P31 734 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-225ENST00000586385 SLC4A5Q9BY07 1137 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 CNTN6Q9UQ52 1028 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 OR51B4Q9Y5P0 310 aa12.26□□□□□ -0.45
BRCA1-225ENST00000586385 KCNU1A8MYU2 1149 aa12.25□□□□□ -0.45
BRCA1-225ENST00000586385 TRUB2O95900 331 aaKnown RBP12.25□□□□□ -0.45
BRCA1-225ENST00000586385 PLA2G2AP14555 144 aa12.25□□□□□ -0.45
BRCA1-225ENST00000586385 CD44P16070 742 aaKnown RBP12.25□□□□□ -0.45
BRCA1-225ENST00000586385 GLDCP23378 1020 aa12.25□□□□□ -0.45
BRCA1-225ENST00000586385 VASPP50552 380 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms