RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 EPHA8P29322 1005 aaPredicted RBP20.19■□□□□ 0.82
PTBP1-208ENST00000585956 GGCXP38435 758 aa20.19■□□□□ 0.82
PTBP1-208ENST00000585956 APBA1Q02410 837 aa20.19■□□□□ 0.82
PTBP1-208ENST00000585956 CENPCQ03188 943 aa20.19■□□□□ 0.82
PTBP1-208ENST00000585956 POM121L1PQ3SYA9 428 aa20.19■□□□□ 0.82
PTBP1-208ENST00000585956 CXorf57Q6NSI4 855 aaKnown RBP20.19■□□□□ 0.82
PTBP1-208ENST00000585956 GJB7Q6PEY0 223 aa20.19■□□□□ 0.82
PTBP1-208ENST00000585956 PIP4K2CQ8TBX8 421 aa20.19■□□□□ 0.82
PTBP1-208ENST00000585956 TSC1Q92574 1164 aa20.19■□□□□ 0.82
PTBP1-208ENST00000585956 FAM131CQ96AQ9 280 aa20.19■□□□□ 0.82
PTBP1-208ENST00000585956 SERAC1Q96JX3 654 aa20.19■□□□□ 0.82
PTBP1-208ENST00000585956 IRX2Q9BZI1 471 aaPredicted RBP20.19■□□□□ 0.82
PTBP1-208ENST00000585956 FZD4Q9ULV1 537 aa20.19■□□□□ 0.82
PTBP1-208ENST00000585956 SCML1Q9UN30 329 aa20.19■□□□□ 0.82
PTBP1-208ENST00000585956 TARSL2A2RTX5 802 aaKnown RBP20.18■□□□□ 0.82
PTBP1-208ENST00000585956 E5RJQ4 531 aa20.18■□□□□ 0.82
PTBP1-208ENST00000585956 LDOC1O95751 146 aaPredicted RBP20.18■□□□□ 0.82
PTBP1-208ENST00000585956 SRPRAP08240 638 aaKnown RBP20.18■□□□□ 0.82
PTBP1-208ENST00000585956 GOT1P17174 413 aa20.18■□□□□ 0.82
PTBP1-208ENST00000585956 MAT2AP31153 395 aaKnown RBP20.18■□□□□ 0.82
PTBP1-208ENST00000585956 CCR5P51681 352 aa20.18■□□□□ 0.82
PTBP1-208ENST00000585956 TARDBPQ13148 414 aaKnown RBP eCLIP20.18■□□□□ 0.822e-6■■■□□ 16.5
PTBP1-208ENST00000585956 NNTQ13423 1086 aa20.18■□□□□ 0.82
PTBP1-208ENST00000585956 CHSY1Q86X52 802 aa20.18■□□□□ 0.82
PTBP1-208ENST00000585956 KDM1BQ8NB78 822 aa20.18■□□□□ 0.82
PTBP1-208ENST00000585956 SMARCE1Q969G3 411 aa20.18■□□□□ 0.82
PTBP1-208ENST00000585956 ALG14Q96F25 216 aa20.18■□□□□ 0.82
PTBP1-208ENST00000585956 SLC4A5Q9BY07 1137 aa20.18■□□□□ 0.82
PTBP1-208ENST00000585956 METTL14Q9HCE5 456 aaKnown RBP20.18■□□□□ 0.82
PTBP1-208ENST00000585956 CNTN6Q9UQ52 1028 aa20.18■□□□□ 0.82
PTBP1-208ENST00000585956 RAI2Q9Y5P3 530 aa20.18■□□□□ 0.82
PTBP1-208ENST00000585956 LRRC72A6NJI9 287 aa20.17■□□□□ 0.82
PTBP1-208ENST00000585956 PPP1R3GB7ZBB8 358 aa20.17■□□□□ 0.82
PTBP1-208ENST00000585956 LATO43561 262 aa20.17■□□□□ 0.82
PTBP1-208ENST00000585956 RFPL3O75679 317 aa20.17■□□□□ 0.82
PTBP1-208ENST00000585956 IL1BP01584 269 aa20.17■□□□□ 0.82
PTBP1-208ENST00000585956 ITGAVP06756 1048 aa20.17■□□□□ 0.82
PTBP1-208ENST00000585956 CCDC40Q4G0X9 1142 aa20.17■□□□□ 0.82
PTBP1-208ENST00000585956 HES3Q5TGS1 186 aa20.17■□□□□ 0.82
PTBP1-208ENST00000585956 SFMBT2Q5VUG0 894 aa20.17■□□□□ 0.82
PTBP1-208ENST00000585956 KLHL10Q6JEL2 608 aa20.17■□□□□ 0.82
PTBP1-208ENST00000585956 FBXL19Q6PCT2 694 aa20.17■□□□□ 0.82
PTBP1-208ENST00000585956 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.17■□□□□ 0.82
PTBP1-208ENST00000585956 TMPRSS12Q86WS5 348 aa20.17■□□□□ 0.82
PTBP1-208ENST00000585956 CCAR2Q8N163 923 aaKnown RBP20.17■□□□□ 0.82
PTBP1-208ENST00000585956 EHBP1Q8NDI1 1231 aa20.17■□□□□ 0.82
PTBP1-208ENST00000585956 SHROOM3Q8TF72 1996 aa20.17■□□□□ 0.82
PTBP1-208ENST00000585956 TLR4O00206 839 aa20.16■□□□□ 0.82
PTBP1-208ENST00000585956 RNASEH1O60930 286 aaKnown RBP20.16■□□□□ 0.82
PTBP1-208ENST00000585956 SDC3O75056 442 aa20.16■□□□□ 0.82
PTBP1-208ENST00000585956 TRUB2O95900 331 aaKnown RBP20.16■□□□□ 0.82
PTBP1-208ENST00000585956 ABCB4P21439 1286 aa20.16■□□□□ 0.82
PTBP1-208ENST00000585956 C5AR1P21730 350 aa20.16■□□□□ 0.82
PTBP1-208ENST00000585956 GCNT1Q02742 428 aa20.16■□□□□ 0.82
PTBP1-208ENST00000585956 SND1Q7KZF4 910 aaKnown RBP eCLIP20.16■□□□□ 0.82
PTBP1-208ENST00000585956 WDTC1Q8N5D0 677 aa20.16■□□□□ 0.82
PTBP1-208ENST00000585956 CEP63Q96MT8 703 aa20.16■□□□□ 0.82
PTBP1-208ENST00000585956 INTS2Q9H0H0 1204 aaKnown RBP20.16■□□□□ 0.82
PTBP1-208ENST00000585956 CEP83Q9Y592 693 aa20.16■□□□□ 0.82
PTBP1-208ENST00000585956 PCDHGA1Q9Y5H4 931 aa20.16■□□□□ 0.82
PTBP1-208ENST00000585956 KCNU1A8MYU2 1149 aa20.15■□□□□ 0.82
PTBP1-208ENST00000585956 C1QL1O75973 258 aa20.15■□□□□ 0.82
PTBP1-208ENST00000585956 TAS2R38P59533 333 aa20.15■□□□□ 0.82
PTBP1-208ENST00000585956 SEMG2Q02383 582 aa20.15■□□□□ 0.82
PTBP1-208ENST00000585956 STILQ15468 1287 aa20.15■□□□□ 0.82
PTBP1-208ENST00000585956 AGBL4Q5VU57 503 aa20.15■□□□□ 0.82
PTBP1-208ENST00000585956 C14orf80Q86SX3 495 aa20.15■□□□□ 0.82
PTBP1-208ENST00000585956 TRIM59Q8IWR1 403 aa20.15■□□□□ 0.82
PTBP1-208ENST00000585956 DDX50Q9BQ39 737 aaKnown RBP20.15■□□□□ 0.82
PTBP1-208ENST00000585956 ANLNQ9NQW6 1124 aa20.15■□□□□ 0.82
PTBP1-208ENST00000585956 GDF3Q9NR23 364 aa20.15■□□□□ 0.82
PTBP1-208ENST00000585956 CTNND2Q9UQB3 1225 aa20.15■□□□□ 0.82
PTBP1-208ENST00000585956 SYNJ2BP-COX16A0A087WUM0 186 aa20.14■□□□□ 0.81
PTBP1-208ENST00000585956 TBC1D3DA0A087WVF3 549 aa20.14■□□□□ 0.81
PTBP1-208ENST00000585956 TBC1D3IA0A087WXS9 549 aa20.14■□□□□ 0.81
PTBP1-208ENST00000585956 TBC1D3EA0A087X179 549 aa20.14■□□□□ 0.81
PTBP1-208ENST00000585956 TBC1D3KA0A087X1G2 549 aa20.14■□□□□ 0.81
PTBP1-208ENST00000585956 TBC1D3FA6NER0 549 aaPredicted RBP20.14■□□□□ 0.81
PTBP1-208ENST00000585956 BECN2A8MW95 431 aa20.14■□□□□ 0.81
PTBP1-208ENST00000585956 TBC1D3LB9A6J9 549 aa20.14■□□□□ 0.81
PTBP1-208ENST00000585956 I6L893 689 aaPredicted RBP20.14■□□□□ 0.81
PTBP1-208ENST00000585956 DFNA5O60443 496 aa20.14■□□□□ 0.81
PTBP1-208ENST00000585956 LETM1O95202 739 aaPredicted RBP20.14■□□□□ 0.81
PTBP1-208ENST00000585956 TBC1D3HP0C7X1 549 aa20.14■□□□□ 0.81
PTBP1-208ENST00000585956 KRT5P13647 590 aa20.14■□□□□ 0.81
PTBP1-208ENST00000585956 JUPP14923 745 aa20.14■□□□□ 0.81
PTBP1-208ENST00000585956 EIF2S3P41091 472 aaKnown RBP20.14■□□□□ 0.81
PTBP1-208ENST00000585956 STX17P56962 302 aa20.14■□□□□ 0.81
PTBP1-208ENST00000585956 KCNH2Q12809 1159 aa20.14■□□□□ 0.81
PTBP1-208ENST00000585956 CNTN1Q12860 1018 aa20.14■□□□□ 0.81
PTBP1-208ENST00000585956 ELAVL3Q14576 367 aaKnown RBP20.14■□□□□ 0.81
PTBP1-208ENST00000585956 OTUD1Q5VV17 481 aaPredicted RBP20.14■□□□□ 0.81
PTBP1-208ENST00000585956 TBC1D3GQ6DHY5 549 aa20.14■□□□□ 0.81
PTBP1-208ENST00000585956 TBC1D3CQ6IPX1 549 aa20.14■□□□□ 0.81
PTBP1-208ENST00000585956 FBXL22Q6P050 247 aa20.14■□□□□ 0.81
PTBP1-208ENST00000585956 BEND5Q7L4P6 421 aa20.14■□□□□ 0.81
PTBP1-208ENST00000585956 TMEM110Q86TL2 294 aa20.14■□□□□ 0.81
PTBP1-208ENST00000585956 TBC1D3Q8IZP1 549 aaPredicted RBP20.14■□□□□ 0.81
PTBP1-208ENST00000585956 ZNF557Q8N988 423 aaPredicted RBP20.14■□□□□ 0.81
PTBP1-208ENST00000585956 NELFBQ8WX92 580 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms