RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 SMG1Q96Q15 3661 aaKnown RBP14.94□□□□□ -0.02
SDF2-202ENST00000585428 TBC1D3DA0A087WVF3 549 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 TBC1D3IA0A087WXS9 549 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 TBC1D3EA0A087X179 549 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 TBC1D3KA0A087X1G2 549 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 TBC1D3FA6NER0 549 aaPredicted RBP14.94□□□□□ -0.02
SDF2-202ENST00000585428 KCNU1A8MYU2 1149 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 TBC1D3LB9A6J9 549 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 YKT6O15498 198 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 TBC1D3HP0C7X1 549 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 ABCB4P21439 1286 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 TACR2P21452 398 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 MZF1P28698 734 aaPredicted RBP14.94□□□□□ -0.02
SDF2-202ENST00000585428 YWHAZP63104 245 aaKnown RBP14.94□□□□□ -0.02
SDF2-202ENST00000585428 CETN1Q12798 172 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 DNAJC3Q13217 504 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 RAP1GAP2Q684P5 730 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 TBC1D3GQ6DHY5 549 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 TBC1D3CQ6IPX1 549 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 TTI2Q6NXR4 508 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 DENND1BQ6P3S1 775 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.94□□□□□ -0.02
SDF2-202ENST00000585428 KANSL1Q7Z3B3 1105 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 SPATS2Q86XZ4 545 aaKnown RBP14.94□□□□□ -0.02
SDF2-202ENST00000585428 ELOA2Q8IYF1 753 aaPredicted RBP14.94□□□□□ -0.02
SDF2-202ENST00000585428 TBC1D3Q8IZP1 549 aaPredicted RBP14.94□□□□□ -0.02
SDF2-202ENST00000585428 EID2Q8N6I1 236 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 MFSD2AQ8NA29 543 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 SMARCE1Q969G3 411 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 FAM149B1Q96BN6 582 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 CRELD1Q96HD1 420 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 KREMEN1Q96MU8 473 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 TIGD1Q96MW7 591 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 KDM4CQ9H3R0 1056 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 POPDC2Q9HBU9 364 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.94□□□□□ -0.02
SDF2-202ENST00000585428 CYTH4Q9UIA0 394 aa14.94□□□□□ -0.02
SDF2-202ENST00000585428 FASNP49327 2511 aaKnown RBP14.94□□□□□ -0.02
SDF2-202ENST00000585428 URB1O60287 2271 aaKnown RBP14.94□□□□□ -0.02
SDF2-202ENST00000585428 PSMA7O14818 248 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 RFPL3O75679 317 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 TRUB2O95900 331 aaKnown RBP14.93□□□□□ -0.02
SDF2-202ENST00000585428 MOCS2O96007 188 aaPredicted RBP14.93□□□□□ -0.02
SDF2-202ENST00000585428 IL1BP01584 269 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 VAV1P15498 845 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 NNMTP40261 264 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 EIF2S3P41091 472 aaKnown RBP14.93□□□□□ -0.02
SDF2-202ENST00000585428 PSMD8P48556 350 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 ARRB1P49407 418 aaPredicted RBP14.93□□□□□ -0.02
SDF2-202ENST00000585428 ACADVLP49748 655 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 STK19P49842 368 aaPredicted RBP14.93□□□□□ -0.02
SDF2-202ENST00000585428 METAP1P53582 386 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 CLDN6P56747 220 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 SULT2A1Q06520 285 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 TARDBPQ13148 414 aaKnown RBP eCLIP14.93□□□□□ -0.02
SDF2-202ENST00000585428 ELAVL3Q14576 367 aaKnown RBP14.93□□□□□ -0.02
SDF2-202ENST00000585428 RTP5Q14D33 572 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 MEA1Q16626 185 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 SFMBT2Q5VUG0 894 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 ISM2Q6H9L7 571 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 FBXL19Q6PCT2 694 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 FOXR2Q6PJQ5 311 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 CACTIN-AS1Q8N1I8 211 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 ZNF606Q8WXB4 792 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 ALG14Q96F25 216 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 MED15Q96RN5 788 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 TRIM62Q9BVG3 475 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 NRSN2Q9GZP1 204 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 THAP9Q9H5L6 903 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 ST7Q9NRC1 585 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 TJP2Q9UDY2 1190 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 SARDHQ9UL12 918 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 BPTFQ12830 3046 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 IGSF10Q6WRI0 2623 aa14.93□□□□□ -0.02
SDF2-202ENST00000585428 PPP1R3GB7ZBB8 358 aa14.92□□□□□ -0.02
SDF2-202ENST00000585428 CAPN9O14815 690 aa14.92□□□□□ -0.02
SDF2-202ENST00000585428 APOEP02649 317 aa14.92□□□□□ -0.02
SDF2-202ENST00000585428 BMP6P22004 513 aa14.92□□□□□ -0.02
SDF2-202ENST00000585428 EPHA8P29322 1005 aaPredicted RBP14.92□□□□□ -0.02
SDF2-202ENST00000585428 HNF1BP35680 557 aa14.92□□□□□ -0.02
SDF2-202ENST00000585428 PPP2CBP62714 309 aa14.92□□□□□ -0.02
SDF2-202ENST00000585428 PPP2CAP67775 309 aa14.92□□□□□ -0.02
SDF2-202ENST00000585428 PITX1P78337 314 aaPredicted RBP14.92□□□□□ -0.02
SDF2-202ENST00000585428 NUCB2P80303 420 aa14.92□□□□□ -0.02
SDF2-202ENST00000585428 KCNH2Q12809 1159 aa14.92□□□□□ -0.02
SDF2-202ENST00000585428 ILKQ13418 452 aa14.92□□□□□ -0.02
SDF2-202ENST00000585428 TAF5Q15542 800 aa14.92□□□□□ -0.02
SDF2-202ENST00000585428 CCDC40Q4G0X9 1142 aa14.92□□□□□ -0.02
SDF2-202ENST00000585428 SLC45A4Q5BKX6 768 aa14.92□□□□□ -0.02
SDF2-202ENST00000585428 C6orf118Q5T5N4 469 aa14.92□□□□□ -0.02
SDF2-202ENST00000585428 RNF219Q5W0B1 726 aaPredicted RBP14.92□□□□□ -0.02
SDF2-202ENST00000585428 PRPF39Q86UA1 669 aaKnown RBP14.92□□□□□ -0.02
SDF2-202ENST00000585428 IQCHQ86VS3 1027 aa14.92□□□□□ -0.02
SDF2-202ENST00000585428 TRIM59Q8IWR1 403 aa14.92□□□□□ -0.02
SDF2-202ENST00000585428 CCAR2Q8N163 923 aaKnown RBP14.92□□□□□ -0.02
SDF2-202ENST00000585428 SPAG5Q96R06 1193 aa14.92□□□□□ -0.02
SDF2-202ENST00000585428 PPM1HQ9ULR3 514 aa14.92□□□□□ -0.02
SDF2-202ENST00000585428 CEP83Q9Y592 693 aa14.92□□□□□ -0.02
SDF2-202ENST00000585428 APC2O95996 2303 aa14.91□□□□□ -0.02
SDF2-202ENST00000585428 E5RJQ4 531 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms