RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 APCDD1Q8J025 514 aa16.72■□□□□ 0.27
ERBB2-222ENST00000584908 CCDC185Q8N715 623 aa16.72■□□□□ 0.27
ERBB2-222ENST00000584908 OR52K2Q8NGK3 314 aa16.72■□□□□ 0.27
ERBB2-222ENST00000584908 ZNF653Q96CK0 615 aa16.72■□□□□ 0.27
ERBB2-222ENST00000584908 FEM1AQ9BSK4 669 aa16.72■□□□□ 0.27
ERBB2-222ENST00000584908 RBSNQ9H1K0 784 aa16.72■□□□□ 0.27
ERBB2-222ENST00000584908 DUSP15Q9H1R2 295 aaPredicted RBP16.72■□□□□ 0.27
ERBB2-222ENST00000584908 FBRSQ9HAH7 460 aa16.72■□□□□ 0.27
ERBB2-222ENST00000584908 BCCIPQ9P287 314 aaKnown RBP eCLIP16.72■□□□□ 0.27
ERBB2-222ENST00000584908 OR12D3Q9UGF7 316 aa16.72■□□□□ 0.27
ERBB2-222ENST00000584908 NEU3Q9UQ49 428 aa16.72■□□□□ 0.27
ERBB2-222ENST00000584908 ERVW-1Q9UQF0 538 aa16.72■□□□□ 0.27
ERBB2-222ENST00000584908 NUP205Q92621 2012 aa16.72■□□□□ 0.27
ERBB2-222ENST00000584908 TNRC6BQ9UPQ9 1833 aaKnown RBP16.72■□□□□ 0.27
ERBB2-222ENST00000584908 SSU72P8A0A1W2PR75 194 aa16.71■□□□□ 0.27
ERBB2-222ENST00000584908 ZBTB24O43167 697 aaPredicted RBP16.71■□□□□ 0.27
ERBB2-222ENST00000584908 SYNCRIPO60506 623 aaKnown RBP16.71■□□□□ 0.27
ERBB2-222ENST00000584908 MFAP3LO75121 409 aa16.71■□□□□ 0.27
ERBB2-222ENST00000584908 RETP07949 1114 aa16.71■□□□□ 0.27
ERBB2-222ENST00000584908 DESP17661 470 aa16.71■□□□□ 0.27
ERBB2-222ENST00000584908 ECT2LQ008S8 904 aa16.71■□□□□ 0.27
ERBB2-222ENST00000584908 ZNF252P-AS1Q0IIN9 211 aa16.71■□□□□ 0.27
ERBB2-222ENST00000584908 ALKBH5Q6P6C2 394 aaKnown RBP16.71■□□□□ 0.27
ERBB2-222ENST00000584908 SLFN11Q7Z7L1 901 aa16.71■□□□□ 0.27
ERBB2-222ENST00000584908 KBTBD6Q86V97 674 aa16.71■□□□□ 0.27
ERBB2-222ENST00000584908 FAM160A2Q8N612 972 aaPredicted RBP16.71■□□□□ 0.27
ERBB2-222ENST00000584908 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.71■□□□□ 0.27
ERBB2-222ENST00000584908 ZYG11BQ9C0D3 744 aa16.71■□□□□ 0.27
ERBB2-222ENST00000584908 MKRN2Q9H000 416 aaKnown RBP16.71■□□□□ 0.27
ERBB2-222ENST00000584908 MRPL47Q9HD33 250 aaKnown RBP16.71■□□□□ 0.27
ERBB2-222ENST00000584908 ABHD10Q9NUJ1 306 aa16.71■□□□□ 0.27
ERBB2-222ENST00000584908 MPP6Q9NZW5 540 aa16.71■□□□□ 0.27
ERBB2-222ENST00000584908 SUN2Q9UH99 717 aa16.71■□□□□ 0.27
ERBB2-222ENST00000584908 DCLK1O15075 740 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 LRP3O75074 770 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 ZNF217O75362 1048 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 TPM1P09493 284 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 HLA-EP13747 358 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 EIF4A3P38919 411 aaKnown RBP16.7■□□□□ 0.26
ERBB2-222ENST00000584908 CTSOP43234 321 aaPredicted RBP16.7■□□□□ 0.26
ERBB2-222ENST00000584908 ST8SIA6P61647 398 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 HNRNPA1L2Q32P51 320 aaKnown RBP16.7■□□□□ 0.26
ERBB2-222ENST00000584908 ZNF783Q6ZMS7 281 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 GAS2L3Q86XJ1 694 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 ARFGAP1Q8N6T3 406 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 OR2T3Q8NH03 318 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 TRIM5Q9C035 493 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 PRSS16Q9NQE7 514 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 USP36Q9P275 1121 aaKnown RBP16.7■□□□□ 0.26
ERBB2-222ENST00000584908 FZD10Q9ULW2 581 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 LAMA1P25391 3075 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 ILVBLA1L0T0 632 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 FAM72CH0Y354 149 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 SRGAP2O75044 1071 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 LRIG2O94898 1065 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 IGLV3-19P01714 112 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 CYP1A2P05177 515 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 PSMA2P25787 234 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 L1CAMP32004 1257 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 SEMA3BQ13214 749 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 ACAP1Q15027 740 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 SLC18A3Q16572 532 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 SPDYCQ5MJ68 293 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 C6orf118Q5T5N4 469 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 FAM72AQ5TYM5 149 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 PMS2CLQ68D20 193 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 FAM72DQ6L9T8 149 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.7■□□□□ 0.26
ERBB2-222ENST00000584908 NLRP14Q86W24 1093 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 FAM72BQ86X60 149 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 TMPRSS6Q8IU80 811 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 CNGA4Q8IV77 575 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 PGBD3Q8N328 593 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 RLN3Q8WXF3 142 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 SPACA7Q96KW9 195 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 MAGEB5Q9BZ81 275 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 TRIM7Q9C029 511 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 THAP2Q9H0W7 228 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 PRDM16Q9HAZ2 1276 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 NCDNQ9UBB6 729 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 MBD1Q9UIS9 605 aaPredicted RBP16.7■□□□□ 0.26
ERBB2-222ENST00000584908 GMEB2Q9UKD1 530 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 SPTBN4Q9H254 2564 aa16.7■□□□□ 0.26
ERBB2-222ENST00000584908 CXorf51AA0A1B0GTR3 108 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 TARSL2A2RTX5 802 aaKnown RBP16.69■□□□□ 0.26
ERBB2-222ENST00000584908 RHOBTB1O94844 696 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 EPN2O95208 641 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 RHOCP08134 193 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 RHOQP17081 205 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 BCKDHBP21953 392 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 TGM1P22735 817 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 OR1E1P30953 314 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 MAPKAPK2P49137 400 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 ADKP55263 362 aaKnown RBP16.69■□□□□ 0.26
ERBB2-222ENST00000584908 ELF2Q15723 593 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 LPAL2Q16609 132 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 EFHC2Q5JST6 749 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 CCDC122Q5T0U0 273 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 RNF219Q5W0B1 726 aaPredicted RBP16.69■□□□□ 0.26
ERBB2-222ENST00000584908 TFAP2DQ7Z6R9 452 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms