RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 RAP1GAP2Q684P5 730 aa16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 RFWD3Q6PCD5 774 aa16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 ZSCAN30Q86W11 494 aa16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 SFTPA1Q8IWL2 248 aa16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 SLC35F6Q8N357 371 aa16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 RPLP0P6Q8NHW5 317 aa16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 HSPH1Q92598 858 aa16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 PRICKLE1Q96MT3 831 aaPredicted RBP16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 PRMT1Q99873 361 aaKnown RBP16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 SIK2Q9H0K1 926 aa16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 DHX35Q9H5Z1 703 aaKnown RBP16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 GPATCH2LQ9NWQ4 482 aa16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 STARD13Q9Y3M8 1113 aa16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 PCDHA3Q9Y5H8 950 aa16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 SNX10Q9Y5X0 201 aa16.46■□□□□ 0.23
CSNK1D-223ENST00000584472 ATG2BQ96BY7 2078 aa16.46■□□□□ 0.22
CSNK1D-223ENST00000584472 CCDC66A2RUB6 948 aa16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 TRIM24O15164 1050 aa16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 TACR2P21452 398 aa16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 GGCXP38435 758 aa16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 KIR2DL1P43626 348 aaPredicted RBP16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 MARCKSL1P49006 195 aa16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 SATB1Q01826 763 aa16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 NRG1Q02297 640 aaPredicted RBP16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 E2F5Q15329 346 aa16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 DPYSL2Q16555 572 aa16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 MEI1Q5TIA1 1274 aa16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 TTC39BQ5VTQ0 682 aaPredicted RBP16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 PKN3Q6P5Z2 889 aa16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 SYT13Q7L8C5 426 aa16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 ERMP1Q7Z2K6 904 aa16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 ANKS1BQ7Z6G8 1248 aa16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 CHSY1Q86X52 802 aa16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 PYROXD2Q8N2H3 581 aa16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 KRT35Q92764 455 aa16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 HES6Q96HZ4 224 aa16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 OR12D3Q9UGF7 316 aa16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 PACSIN2Q9UNF0 486 aaPredicted RBP16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.45■□□□□ 0.22
CSNK1D-223ENST00000584472 MIF4GDA9UHW6 222 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 F5H5T6 163 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 FAM72CH0Y354 149 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 K7ESF4 209 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 TBL1XO60907 577 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 LRP3O75074 770 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 MSNP26038 577 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 L1CAMP32004 1257 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 PEX5P50542 639 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 SGSHP51688 502 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 ARSEP51690 589 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 SEC13P55735 322 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 SEMA3BQ13214 749 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 AUHQ13825 339 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 EIF4HQ15056 248 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 C2orf27AQ580R0 203 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 RABGAP1LQ5R372 815 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 ARTNQ5T4W7 220 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 FAM72AQ5TYM5 149 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 FAM72DQ6L9T8 149 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 TRMT11Q7Z4G4 463 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 C14orf80Q86SX3 495 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 LONP2Q86WA8 852 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 FAM72BQ86X60 149 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 ZNF683Q8IZ20 524 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 LGI2Q8N0V4 545 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.44■□□□□ 0.222e-6■□□□□ 10.6
CSNK1D-223ENST00000584472 FAM71BQ8TC56 605 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 KCTD15Q96SI1 283 aaPredicted RBP16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 KLHL11Q9NVR0 708 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 DDX56Q9NY93 547 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 VANGL2Q9ULK5 521 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 MMP17Q9ULZ9 603 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 SMG5Q9UPR3 1016 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 JRKLQ9Y4A0 524 aa16.44■□□□□ 0.22
CSNK1D-223ENST00000584472 MYO18AQ92614 2054 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 PRRT4C9JH25 899 aa16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 E9PAM4 449 aa16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 DDX3YO15523 660 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 CDH6P55285 790 aa16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 GNG11P61952 73 aa16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 RPS24P62847 133 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 C5orf22Q49AR2 442 aa16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 MANEALQ5VSG8 457 aa16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 FBXL22Q6P050 247 aa16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 TSSK4Q6SA08 328 aa16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 KATNAL2Q8IYT4 538 aa16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 UBL4BQ8N7F7 174 aa16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 ZNF513Q8N8E2 541 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 IL17RCQ8NAC3 791 aa16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 WFIKKN2Q8TEU8 576 aa16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 RAPGEF5Q92565 580 aa16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 MYEOVQ96EZ4 313 aa16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 PCDH18Q9HCL0 1135 aa16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 C2orf42Q9NWW7 574 aa16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 CLEC4EQ9ULY5 219 aa16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 SLC8A2Q9UPR5 921 aa16.43■□□□□ 0.22
CSNK1D-223ENST00000584472 IGLV3-10A0A075B6K4 115 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 DRGXA6NNA5 263 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 NPC1O15118 1278 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms