RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 POLR2DO15514 142 aaKnown RBP5.55□□□□□ -1.52
VAPA-207ENST00000583879 RFPL3O75679 317 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 HLA-DRAP01903 254 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 WNT1P04628 370 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 IGHV4-34P06331 123 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 ATP5BP06576 529 aaKnown RBP5.55□□□□□ -1.52
VAPA-207ENST00000583879 DLDP09622 509 aaKnown RBP5.55□□□□□ -1.52
VAPA-207ENST00000583879 SLFN14P0C7P3 912 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 CD58P19256 250 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 ALAS2P22557 587 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 HOXD9P28356 352 aaPredicted RBP5.55□□□□□ -1.52
VAPA-207ENST00000583879 HARS2P49590 506 aaKnown RBP5.55□□□□□ -1.52
VAPA-207ENST00000583879 VAMP7P51809 220 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 GALCP54803 685 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 CLDN6P56747 220 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 PCBP4P57723 403 aaKnown RBP5.55□□□□□ -1.52
VAPA-207ENST00000583879 ZNF445P59923 1031 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 YWHAGP61981 247 aaKnown RBP eCLIP5.55□□□□□ -1.52
VAPA-207ENST00000583879 SFSWAPQ12872 951 aaKnown RBP5.55□□□□□ -1.52
VAPA-207ENST00000583879 STK4Q13043 487 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 DNAJC3Q13217 504 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 ILKQ13418 452 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 CUL4BQ13620 913 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 SHBQ15464 509 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 FOXD4L6Q3SYB3 417 aaPredicted RBP5.55□□□□□ -1.52
VAPA-207ENST00000583879 TTC31Q49AM3 519 aaPredicted RBP5.55□□□□□ -1.52
VAPA-207ENST00000583879 FNDC3BQ53EP0 1204 aaKnown RBP5.55□□□□□ -1.52
VAPA-207ENST00000583879 ZNF394Q53GI3 561 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 RAB41Q5JT25 222 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 C1orf220Q5T0J3 134 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 ADGRF1Q5T601 910 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 ZNF468Q5VIY5 522 aaPredicted RBP5.55□□□□□ -1.52
VAPA-207ENST00000583879 MBLAC2Q68D91 279 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 PM20D1Q6GTS8 502 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 FBXL19Q6PCT2 694 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 SHC4Q6S5L8 630 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 FOXD4L3Q6VB84 417 aaPredicted RBP5.55□□□□□ -1.52
VAPA-207ENST00000583879 USP30Q70CQ3 517 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 CHST9Q7L1S5 443 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 PIGZQ86VD9 579 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 AHI1Q8N157 1196 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 CACTIN-AS1Q8N1I8 211 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 ZNF843Q8N446 348 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 EID2Q8N6I1 236 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 ZNF366Q8N895 744 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.55□□□□□ -1.52
VAPA-207ENST00000583879 GPATCH11Q8N954 259 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 WFIKKN2Q8TEU8 576 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 FGF11Q92914 225 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 PLD4Q96BZ4 506 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 HEXIM2Q96MH2 286 aaKnown RBP5.55□□□□□ -1.52
VAPA-207ENST00000583879 FCRL3Q96P31 734 aaPredicted RBP5.55□□□□□ -1.52
VAPA-207ENST00000583879 UCN2Q96RP3 112 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 BACH2Q9BYV9 841 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 NEUROG2Q9H2A3 272 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 KCTD10Q9H3F6 313 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 EBF2Q9HAK2 575 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 MAGEF1Q9HAY2 307 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 APOBEC3GQ9HC16 384 aaKnown RBP5.55□□□□□ -1.52
VAPA-207ENST00000583879 TPSG1Q9NRR2 321 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 ABCB8Q9NUT2 735 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 FBXL12Q9NXK8 326 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 STOML2Q9UJZ1 356 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 MTMR6Q9Y217 621 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 ITPR1Q14643 2758 aa5.55□□□□□ -1.52
VAPA-207ENST00000583879 SMG1Q96Q15 3661 aaKnown RBP5.54□□□□□ -1.52
VAPA-207ENST00000583879 MYOFQ9NZM1 2061 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 A0A1W2PNR3 127 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 A0A1W2PR77 199 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 C10orf142B7Z368 130 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 PDXKO00764 312 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 WNT9AO14904 365 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 YKT6O15498 198 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 DYRK3O43781 588 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 KLRC4O43908 158 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 CUTAO60888 179 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 RNASEH1O60930 286 aaKnown RBP5.54□□□□□ -1.52
VAPA-207ENST00000583879 LATS1O95835 1130 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 ZBED1O96006 694 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 NR3C1P04150 777 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 PABPC1P11940 636 aaKnown RBP5.54□□□□□ -1.52
VAPA-207ENST00000583879 CKMT2P17540 419 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 POLR2EP19388 210 aaKnown RBP5.54□□□□□ -1.52
VAPA-207ENST00000583879 ABCB4P21439 1286 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 CD38P28907 300 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 ACTN2P35609 894 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 PIK3CAP42336 1068 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 AFMP43652 599 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 RXRGP48443 463 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 ARRB1P49407 418 aaPredicted RBP5.54□□□□□ -1.52
VAPA-207ENST00000583879 ACADVLP49748 655 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 TKTL1P51854 596 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 SLC8A3P57103 927 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 CFHR1Q03591 330 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 BNIP3Q12983 259 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 MPP7Q5T2T1 576 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 HES3Q5TGS1 186 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 BSPRYQ5W0U4 402 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 CEP135Q66GS9 1140 aa5.54□□□□□ -1.52
VAPA-207ENST00000583879 ZNF776Q68DI1 518 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms