RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 USP33Q8TEY7 942 aa11.47□□□□□ -0.57
GGA3-213ENST00000582486 BADQ92934 168 aa11.47□□□□□ -0.57
GGA3-213ENST00000582486 IGSF8Q969P0 613 aa11.47□□□□□ -0.57
GGA3-213ENST00000582486 LRRC39Q96DD0 335 aa11.47□□□□□ -0.57
GGA3-213ENST00000582486 TEKT5Q96M29 485 aa11.47□□□□□ -0.57
GGA3-213ENST00000582486 TSGA13Q96PP4 275 aa11.47□□□□□ -0.57
GGA3-213ENST00000582486 VAT1Q99536 393 aa11.47□□□□□ -0.57
GGA3-213ENST00000582486 ZYG11BQ9C0D3 744 aa11.47□□□□□ -0.57
GGA3-213ENST00000582486 NACA2Q9H009 215 aa11.47□□□□□ -0.57
GGA3-213ENST00000582486 RABEP2Q9H5N1 569 aa11.47□□□□□ -0.57
GGA3-213ENST00000582486 PLAC1Q9HBJ0 212 aa11.47□□□□□ -0.57
GGA3-213ENST00000582486 CXXC1Q9P0U4 656 aaPredicted RBP11.47□□□□□ -0.57
GGA3-213ENST00000582486 RSPH14Q9UHP6 348 aa11.47□□□□□ -0.57
GGA3-213ENST00000582486 SLC24A2Q9UI40 661 aa11.47□□□□□ -0.57
GGA3-213ENST00000582486 DNMT3LQ9UJW3 386 aa11.47□□□□□ -0.57
GGA3-213ENST00000582486 TRHDEQ9UKU6 1024 aa11.47□□□□□ -0.57
GGA3-213ENST00000582486 GOLGA6L7A0A1B0GV03 622 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 RASA4BC9J798 803 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 TEX28O15482 410 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 RASA4O43374 803 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 CPP00450 1065 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 LINC00271P0C7V0 271 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 CCNB1P14635 433 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 NFKB1P19838 968 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 ELF1P32519 619 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 CA8P35219 290 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 PPM1AP35813 382 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 PAPOLAP51003 745 aaKnown RBP11.46□□□□□ -0.57
GGA3-213ENST00000582486 KPNA1P52294 538 aaPredicted RBP11.46□□□□□ -0.57
GGA3-213ENST00000582486 CRADDP78560 199 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 TWF1Q12792 350 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 PLD1Q13393 1074 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 KLHL38Q2WGJ6 581 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 HECTD3Q5T447 861 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 AFMIDQ63HM1 303 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 LEKR1Q6ZMV7 388 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 SRRM1Q8IYB3 904 aaKnown RBP11.46□□□□□ -0.57
GGA3-213ENST00000582486 ZNF276Q8N554 614 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 CNTD1Q8N815 330 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 OVCA2Q8WZ82 227 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 MYRFLQ96LU7 910 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 CDK5RAP1Q96SZ6 601 aaKnown RBP11.46□□□□□ -0.57
GGA3-213ENST00000582486 CYTH2Q99418 400 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 PAFAH2Q99487 392 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 EBNA1BP2Q99848 306 aaKnown RBP11.46□□□□□ -0.57
GGA3-213ENST00000582486 PRMT1Q99873 361 aaKnown RBP11.46□□□□□ -0.57
GGA3-213ENST00000582486 GBA3Q9H227 469 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 NOL6Q9H6R4 1146 aaKnown RBP11.46□□□□□ -0.57
GGA3-213ENST00000582486 PSMC3IPQ9P2W1 217 aaPredicted RBP11.46□□□□□ -0.57
GGA3-213ENST00000582486 PPARGC1AQ9UBK2 798 aaKnown RBP11.46□□□□□ -0.57
GGA3-213ENST00000582486 PRKAG2Q9UGJ0 569 aa11.46□□□□□ -0.57
GGA3-213ENST00000582486 IGLV3-10A0A075B6K4 115 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 CARNS1A5YM72 827 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 ARHGAP42A6NI28 874 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 COCHO43405 550 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 LILRB3O75022 631 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 SPAG6O75602 509 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 SPATA31D3P0C874 917 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 MLNP12872 115 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 RHOQP17081 205 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 SESN2P58004 480 aaPredicted RBP11.46□□□□□ -0.58
GGA3-213ENST00000582486 HTRA4P83105 476 aaPredicted RBP11.46□□□□□ -0.58
GGA3-213ENST00000582486 PPIGQ13427 754 aaKnown RBP eCLIP11.46□□□□□ -0.584e-7■■■□□ 17.7
GGA3-213ENST00000582486 ZSCAN26Q16670 478 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 KBTBD12Q3ZCT8 623 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 NUGGCQ68CJ6 796 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 NADSYN1Q6IA69 706 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 UNC5AQ6ZN44 842 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 SPATA31D4Q6ZUB0 917 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 UBE2Q1Q7Z7E8 422 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 PRPF39Q86UA1 669 aaKnown RBP11.46□□□□□ -0.58
GGA3-213ENST00000582486 FIBCD1Q8N539 461 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.46□□□□□ -0.58
GGA3-213ENST00000582486 MYEOVQ96EZ4 313 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 ZNF419Q96HQ0 510 aaPredicted RBP11.46□□□□□ -0.58
GGA3-213ENST00000582486 RPRD1AQ96P16 312 aaPredicted RBP11.46□□□□□ -0.58
GGA3-213ENST00000582486 ZBED2Q9BTP6 218 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 PPCSQ9HAB8 311 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 TMEM248Q9NWD8 314 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 TRPM5Q9NZQ8 1165 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 FETUBQ9UGM5 382 aa11.46□□□□□ -0.58
GGA3-213ENST00000582486 HBS1LQ9Y450 684 aaKnown RBP11.46□□□□□ -0.58
GGA3-213ENST00000582486 MATN3O15232 486 aa11.45□□□□□ -0.58
GGA3-213ENST00000582486 USP12O75317 370 aa11.45□□□□□ -0.58
GGA3-213ENST00000582486 AP2A1O95782 977 aa11.45□□□□□ -0.58
GGA3-213ENST00000582486 KRT15P19012 456 aa11.45□□□□□ -0.58
GGA3-213ENST00000582486 MSH2P43246 934 aa11.45□□□□□ -0.58
GGA3-213ENST00000582486 VEPH1Q14D04 833 aa11.45□□□□□ -0.58
GGA3-213ENST00000582486 RASA2Q15283 850 aa11.45□□□□□ -0.58
GGA3-213ENST00000582486 ITPRIPL1Q6GPH6 555 aa11.45□□□□□ -0.58
GGA3-213ENST00000582486 ADGRD1Q6QNK2 874 aa11.45□□□□□ -0.58
GGA3-213ENST00000582486 OTOP3Q7RTS5 596 aa11.45□□□□□ -0.58
GGA3-213ENST00000582486 DNAJB7Q7Z6W7 309 aaPredicted RBP11.45□□□□□ -0.58
GGA3-213ENST00000582486 TRABD2AQ86V40 505 aa11.45□□□□□ -0.58
GGA3-213ENST00000582486 CHSY1Q86X52 802 aa11.45□□□□□ -0.58
GGA3-213ENST00000582486 CIR1Q86X95 450 aaPredicted RBP11.45□□□□□ -0.58
GGA3-213ENST00000582486 TCEAL8Q8IYN2 117 aa11.45□□□□□ -0.58
GGA3-213ENST00000582486 UMODL1-AS1Q8N2C9 162 aa11.45□□□□□ -0.58
GGA3-213ENST00000582486 DHRS4Q9BTZ2 278 aa11.45□□□□□ -0.58
GGA3-213ENST00000582486 MLPHQ9BV36 600 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms