RNA–Protein interactions for RNA: ENST00000581679.1

NDEL1-211, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-211ENST00000581679 ZNF398Q8TD17 642 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 MGARPQ8TDB4 240 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 PIGOQ8TEQ8 1089 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 PARD3BQ8TEW8 1205 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 GRK7Q8WTQ7 553 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 TMEM174Q8WUU8 243 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 MAIP1Q8WWC4 291 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 PSPC1Q8WXF1 523 aaKnown RBP3.97□□□□□ -1.77
NDEL1-211ENST00000581679 DNAJC9Q8WXX5 260 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 KRT35Q92764 455 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 BICD1Q96G01 975 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 TRAPPC9Q96Q05 1148 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 NUDCD1Q96RS6 583 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 TSC22D3Q99576 134 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 DPYSL5Q9BPU6 564 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 CCDC77Q9BR77 488 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 FAM167BQ9BTA0 163 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 TUBB6Q9BUF5 446 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 POLR3CQ9BUI4 534 aaPredicted RBP3.97□□□□□ -1.77
NDEL1-211ENST00000581679 CCDC28BQ9BUN5 200 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 DDX23Q9BUQ8 820 aaKnown RBP3.97□□□□□ -1.77
NDEL1-211ENST00000581679 ANO3Q9BYT9 981 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 PITPNM3Q9BZ71 974 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 YIPF3Q9GZM5 350 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 UBA5Q9GZZ9 404 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 KLC2Q9H0B6 622 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 TMX4Q9H1E5 349 aaPredicted RBP3.97□□□□□ -1.77
NDEL1-211ENST00000581679 VCXQ9H320 206 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 CDC42EP4Q9H3Q1 356 aaKnown RBP3.97□□□□□ -1.77
NDEL1-211ENST00000581679 DCLRE1BQ9H816 532 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 PPCSQ9HAB8 311 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 MSL2Q9HCI7 577 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 KCNK9Q9NPC2 374 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 SAR1AQ9NR31 198 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 PAPOLBQ9NRJ5 636 aaKnown RBP3.97□□□□□ -1.77
NDEL1-211ENST00000581679 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.97□□□□□ -1.77
NDEL1-211ENST00000581679 DMAC2Q9NW81 257 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 TAS2R14Q9NYV8 317 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 TMOD4Q9NZQ9 345 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 SENP1Q9P0U3 644 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 UVRAGQ9P2Y5 699 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 SEL1LQ9UBV2 794 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 NKX1-2Q9UD57 310 aaPredicted RBP3.97□□□□□ -1.77
NDEL1-211ENST00000581679 SAP30BPQ9UHR5 308 aaKnown RBP3.97□□□□□ -1.77
NDEL1-211ENST00000581679 LNPEPQ9UIQ6 1025 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 MYRFQ9Y2G1 1151 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 FRMD4BQ9Y2L6 1034 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 LRCH1Q9Y2L9 728 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 VWA7Q9Y334 891 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 CTDP1Q9Y5B0 961 aaPredicted RBP3.97□□□□□ -1.77
NDEL1-211ENST00000581679 USH1CQ9Y6N9 552 aa3.97□□□□□ -1.77
NDEL1-211ENST00000581679 GAKO14976 1311 aa3.96□□□□□ -1.77
NDEL1-211ENST00000581679 FRMPD2Q68DX3 1309 aaPredicted RBP3.96□□□□□ -1.77
NDEL1-211ENST00000581679 MYH14Q7Z406 1995 aaKnown RBP3.96□□□□□ -1.77
NDEL1-211ENST00000581679 COL24A1Q17RW2 1714 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 DOT1LQ8TEK3 1739 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 ARFGEF1Q9Y6D6 1849 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 TCRBV7S2A1N4TA0A589 114 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 PMS2P1A4D2B8 440 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 TMEM110-MUSTN1A8MSY1 372 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 FOXN3O00409 490 aaPredicted RBP3.96□□□□□ -1.78
NDEL1-211ENST00000581679 SPOPO43791 374 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 SMIM24O75264 130 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 ZWINTO95229 277 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 FOSP01100 380 aaPredicted RBP3.96□□□□□ -1.78
NDEL1-211ENST00000581679 GH1P01241 217 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 CREB1P16220 341 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 SP100P23497 879 aaPredicted RBP3.96□□□□□ -1.78
NDEL1-211ENST00000581679 IVDP26440 423 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 MARK3P27448 753 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 CIITAP33076 1130 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 RFC4P35249 363 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 SREBF1P36956 1147 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 VHLP40337 213 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 STAT3P40763 770 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 BTDP43251 543 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 PTDSS1P48651 473 aaKnown RBP3.96□□□□□ -1.78
NDEL1-211ENST00000581679 RPS6KA3P51812 740 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 SMAD3P84022 425 aaKnown RBP3.96□□□□□ -1.78
NDEL1-211ENST00000581679 KRT17Q04695 432 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 GABPAQ06546 454 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 MGAT5Q09328 741 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 CETN1Q12798 172 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 SF3A3Q12874 501 aaKnown RBP eCLIP3.96□□□□□ -1.78
NDEL1-211ENST00000581679 DYNC1I2Q13409 638 aaKnown RBP3.96□□□□□ -1.78
NDEL1-211ENST00000581679 SPARCL1Q14515 664 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 RASA2Q15283 850 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 SLC5A9Q2M3M2 681 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 SLC45A4Q5BKX6 768 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 UBAP2Q5T6F2 1119 aaKnown RBP3.96□□□□□ -1.78
NDEL1-211ENST00000581679 PRAMEF9Q5VWM5 478 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 TBC1D9BQ66K14 1250 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 OR52E8Q6IFG1 317 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 ZNF585AQ6P3V2 769 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 KLHDC10Q6PID8 442 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 MTHFD1LQ6UB35 978 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 RNF207Q6ZRF8 634 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 ZNF804AQ7Z570 1209 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 SESTD1Q86VW0 696 aa3.96□□□□□ -1.78
NDEL1-211ENST00000581679 LONP2Q86WA8 852 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms