RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 CTSOP43234 321 aaPredicted RBP17.47■□□□□ 0.39
CDC42EP4-206ENST00000581014 SULT1E1P49888 294 aa17.47■□□□□ 0.39
CDC42EP4-206ENST00000581014 CDH4P55283 916 aa17.47■□□□□ 0.39
CDC42EP4-206ENST00000581014 GSCP56915 257 aaPredicted RBP17.47■□□□□ 0.39
CDC42EP4-206ENST00000581014 DEUP1Q05D60 604 aa17.47■□□□□ 0.39
CDC42EP4-206ENST00000581014 SFSWAPQ12872 951 aaKnown RBP17.47■□□□□ 0.39
CDC42EP4-206ENST00000581014 ZNF177Q13360 481 aaPredicted RBP17.47■□□□□ 0.39
CDC42EP4-206ENST00000581014 TTC31Q49AM3 519 aaPredicted RBP17.47■□□□□ 0.39
CDC42EP4-206ENST00000581014 TRNP1Q6NT89 227 aa17.47■□□□□ 0.39
CDC42EP4-206ENST00000581014 C14orf80Q86SX3 495 aa17.47■□□□□ 0.39
CDC42EP4-206ENST00000581014 C1orf216Q8TAB5 229 aa17.47■□□□□ 0.39
CDC42EP4-206ENST00000581014 HAPLN3Q96S86 360 aa17.47■□□□□ 0.39
CDC42EP4-206ENST00000581014 FEM1AQ9BSK4 669 aa17.47■□□□□ 0.39
CDC42EP4-206ENST00000581014 SGK2Q9HBY8 427 aa17.47■□□□□ 0.39
CDC42EP4-206ENST00000581014 A0A1B0GTW7 788 aa17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 TTC34A8MYJ7 566 aa17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 SYPP08247 313 aa17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 ATP1A3P13637 1013 aa17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 PDGFRAP16234 1089 aa17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 MZF1P28698 734 aaPredicted RBP17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 ACSL1P33121 698 aa17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 RDXP35241 583 aaKnown RBP17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 CENPCQ03188 943 aa17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 PTP4A2Q12974 167 aa17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 C2CD6Q53TS8 623 aa17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 ARTNQ5T4W7 220 aa17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 DCAF12L1Q5VU92 463 aa17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 RNF219Q5W0B1 726 aaPredicted RBP17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 CIR1Q86X95 450 aaPredicted RBP17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 RGL4Q8IZJ4 473 aa17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 AOPEPQ8N6M6 819 aa17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 PTPRN2Q92932 1015 aa17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 ZDHHC5Q9C0B5 715 aa17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 BTBD1Q9H0C5 482 aa17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 PABPC3Q9H361 631 aaKnown RBP17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 MTG2Q9H4K7 406 aa17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 OSGEPQ9NPF4 335 aa17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 CEP295Q9C0D2 2601 aa17.46■□□□□ 0.39
CDC42EP4-206ENST00000581014 CHD8Q9HCK8 2581 aa17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 MAP1BP46821 2468 aaKnown RBP17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 MEI4A8MW99 385 aa17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 C10orf142B7Z368 130 aa17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 GOLGA8SH3BPF8 625 aa17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 RNASEH1O60930 286 aaKnown RBP17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 NNMTP40261 264 aa17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 IRAK1P51617 712 aa17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 KLHL40Q2TBA0 621 aa17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 ANO6Q4KMQ2 910 aa17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 SETD3Q86TU7 594 aaPredicted RBP17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 CACUL1Q86Y37 369 aa17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 PHF13Q86YI8 300 aaPredicted RBP17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 DHX40Q8IX18 779 aaKnown RBP17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 OR52K2Q8NGK3 314 aa17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 FRS2Q8WU20 508 aa17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 PCMTD1Q96MG8 357 aaPredicted RBP17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 PCDHB18PQ96TA0 734 aa17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 FAM129BQ96TA1 746 aa17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 SIK2Q9H0K1 926 aa17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 DNAAF2Q9NVR5 837 aaKnown RBP17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 ADAMTS1Q9UHI8 967 aa17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 MYO6Q9UM54 1294 aa17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 EPG5Q9HCE0 2579 aa17.45■□□□□ 0.38
CDC42EP4-206ENST00000581014 ASCC3Q8N3C0 2202 aaKnown RBP17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 SMTNL1A8MU46 457 aa17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 ATP9BO43861 1147 aa17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 SEMA4FO95754 770 aa17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 CEACAM1P13688 526 aa17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 MAOBP27338 520 aa17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 PTPN9P43378 593 aa17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 ATXN3P54252 364 aaPredicted RBP17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 SEMA3BQ13214 749 aa17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 SLC14A1Q13336 389 aa17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 ELAVL3Q14576 367 aaKnown RBP17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 CST6Q15828 149 aa17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 CLEC16AQ2KHT3 1053 aa17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 LRRC31Q6UY01 552 aa17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 PIP4P1Q86T03 277 aa17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 CENPIQ92674 756 aaPredicted RBP17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 CFAP57Q96MR6 1250 aa17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 RTN4Q9NQC3 1192 aaKnown RBP17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 FZD4Q9ULV1 537 aa17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 NCKAP1Q9Y2A7 1128 aa17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 CACNA1BQ00975 2339 aa17.44■□□□□ 0.38
CDC42EP4-206ENST00000581014 PCDH15Q96QU1 1955 aa17.43■□□□□ 0.38
CDC42EP4-206ENST00000581014 C2CD4BA6NLJ0 364 aa17.43■□□□□ 0.38
CDC42EP4-206ENST00000581014 GJB3O75712 270 aa17.43■□□□□ 0.38
CDC42EP4-206ENST00000581014 CNTN5O94779 1100 aa17.43■□□□□ 0.38
CDC42EP4-206ENST00000581014 CCDC172P0C7W6 258 aa17.43■□□□□ 0.38
CDC42EP4-206ENST00000581014 GGCXP38435 758 aa17.43■□□□□ 0.38
CDC42EP4-206ENST00000581014 MAPK8P45983 427 aa17.43■□□□□ 0.38
CDC42EP4-206ENST00000581014 NSFP46459 744 aaKnown RBP17.43■□□□□ 0.38
CDC42EP4-206ENST00000581014 STK19P49842 368 aaPredicted RBP17.43■□□□□ 0.38
CDC42EP4-206ENST00000581014 NRG1Q02297 640 aaPredicted RBP17.43■□□□□ 0.38
CDC42EP4-206ENST00000581014 CCDC14Q49A88 953 aa17.43■□□□□ 0.38
CDC42EP4-206ENST00000581014 ALFQ53S48 1182 aa17.43■□□□□ 0.38
CDC42EP4-206ENST00000581014 N4BP2L1Q5TBK1 243 aaPredicted RBP17.43■□□□□ 0.38
CDC42EP4-206ENST00000581014 ZNF783Q6ZMS7 281 aa17.43■□□□□ 0.38
CDC42EP4-206ENST00000581014 STRADAQ7RTN6 431 aa17.43■□□□□ 0.38
CDC42EP4-206ENST00000581014 FAM124AQ86V42 546 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms