RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 TNK2Q07912 1038 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 ZNF177Q13360 481 aaPredicted RBP10.69□□□□□ -0.7
CCDC47-203ENST00000580986 CDH18Q13634 790 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 TFDP2Q14188 446 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 EIF4HQ15056 248 aaKnown RBP10.69□□□□□ -0.7
CCDC47-203ENST00000580986 PAFAH1B3Q15102 231 aaKnown RBP10.69□□□□□ -0.7
CCDC47-203ENST00000580986 ANO4Q32M45 955 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 PARP15Q460N3 678 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 ALFQ53S48 1182 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 ANKRD20A8PQ5CZ79 823 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 ZFYVE27Q5T4F4 411 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 DCAF12L1Q5VU92 463 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 PAPD7Q5XG87 772 aaKnown RBP10.69□□□□□ -0.7
CCDC47-203ENST00000580986 CXorf57Q6NSI4 855 aaKnown RBP10.69□□□□□ -0.7
CCDC47-203ENST00000580986 SPOCD1Q6ZMY3 1216 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 TPGS1Q6ZTW0 290 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 NUDT18Q6ZVK8 323 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 MFN1Q8IWA4 741 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 PHTF2Q8N3S3 785 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 TTC16Q8NEE8 873 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 WFIKKN2Q8TEU8 576 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 CHFRQ96EP1 664 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 MYEOVQ96EZ4 313 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 P2RY11Q96G91 374 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 LMLNQ96KR4 655 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 CALN1Q9BXU9 219 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 MAGEH1Q9H213 219 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 KIAA1522Q9P206 1035 aaPredicted RBP10.69□□□□□ -0.7
CCDC47-203ENST00000580986 TTC7AQ9ULT0 858 aaPredicted RBP10.69□□□□□ -0.7
CCDC47-203ENST00000580986 TCF20Q9UGU0 1960 aaKnown RBP10.68□□□□□ -0.7
CCDC47-203ENST00000580986 CTAGE9A4FU28 777 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 SPECC1L-ADORA2AF8WAN1 911 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 MAN2B1O00754 1011 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 TRDMT1O14717 391 aaKnown RBP10.68□□□□□ -0.7
CCDC47-203ENST00000580986 SCAMP3O14828 347 aaKnown RBP10.68□□□□□ -0.7
CCDC47-203ENST00000580986 NCAM2O15394 837 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 DAPK3O43293 454 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 TSPAN3O60637 253 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 TULP3O75386 442 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 ZNF189O75820 626 aaPredicted RBP10.68□□□□□ -0.7
CCDC47-203ENST00000580986 CD48P09326 243 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 TGM2P21980 687 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 OR1E1P30953 314 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 GJC1P36383 396 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 GGCXP38435 758 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 OPRD1P41143 372 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 NR2C2P49116 596 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 DGKGP49619 791 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 IRAK1P51617 712 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 ZNF33AQ06730 810 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 AFMIDQ63HM1 303 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 RWDD4Q6NW29 188 aaKnown RBP10.68□□□□□ -0.7
CCDC47-203ENST00000580986 TMCO3Q6UWJ1 677 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 MFSD7Q6UXD7 560 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 BBS12Q6ZW61 710 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 BZW1Q7L1Q6 419 aaKnown RBP10.68□□□□□ -0.7
CCDC47-203ENST00000580986 AHI1Q8N157 1196 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 CFAP52Q8N1V2 620 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 TERB1Q8NA31 727 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 PCDH19Q8TAB3 1148 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 CCDC26Q8TAB7 109 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 KCNV2Q8TDN2 545 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 FATE1Q969F0 183 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 ACDQ96AP0 544 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 SHDQ96IW2 340 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 PBKQ96KB5 322 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 NAPGQ99747 312 aaPredicted RBP10.68□□□□□ -0.7
CCDC47-203ENST00000580986 MAGEB5Q9BZ81 275 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 OSBPL8Q9BZF1 889 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 KLC2Q9H0B6 622 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 LRRC19Q9H756 370 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 MPP6Q9NZW5 540 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 DEC1Q9P2X7 70 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 SNX12Q9UMY4 172 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 PACSIN2Q9UNF0 486 aaPredicted RBP10.68□□□□□ -0.7
CCDC47-203ENST00000580986 SNX10Q9Y5X0 201 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 MUC3AQ02505 3323 aa10.68□□□□□ -0.7
CCDC47-203ENST00000580986 H0Y626 953 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 KCNK3O14649 394 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 NPC1O15118 1278 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 TIMM44O43615 452 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 NARSO43776 548 aaKnown RBP10.67□□□□□ -0.7
CCDC47-203ENST00000580986 RAMP2O60895 175 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 CNTN5O94779 1100 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 TJP3O95049 919 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 CISD3P0C7P0 127 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 PYGMP11217 842 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 DRD1P21728 446 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 HLA-FP30511 346 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 DEKP35659 375 aaKnown RBP10.67□□□□□ -0.7
CCDC47-203ENST00000580986 GRIA2P42262 883 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 STARD6P59095 220 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 SULT2A1Q06520 285 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 KLF1Q13351 362 aaPredicted RBP10.67□□□□□ -0.7
CCDC47-203ENST00000580986 MLF2Q15773 248 aaPredicted RBP10.67□□□□□ -0.7
CCDC47-203ENST00000580986 FBXO43Q4G163 708 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 SLC44A4Q53GD3 710 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 TMEM196Q5HYL7 178 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 SEL1L2Q5TEA6 688 aa10.67□□□□□ -0.7
CCDC47-203ENST00000580986 NCBP2-AS2Q69YL0 99 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms