RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 ERVW-1Q9UQF0 538 aa13.65□□□□□ -0.22
NUP85-215ENST00000580879 BZW2Q9Y6E2 419 aaKnown RBP13.65□□□□□ -0.22
NUP85-215ENST00000580879 MUC22E2RYF6 1773 aaPredicted RBP13.65□□□□□ -0.22
NUP85-215ENST00000580879 IGLV3-10A0A075B6K4 115 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 A0A087X0T9 212 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 TTC34A8MYJ7 566 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 MAP3K13O43283 966 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 RETP07949 1114 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 RHOCP08134 193 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 FAM228BP0C875 321 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 PSMA2P25787 234 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 ECT2LQ008S8 904 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 RWDD4Q6NW29 188 aaKnown RBP13.64□□□□□ -0.23
NUP85-215ENST00000580879 ARMCX6Q7L4S7 300 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 VPS36Q86VN1 386 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 TMEFF1Q8IYR6 380 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 PYROXD2Q8N2H3 581 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 ALG14Q96F25 216 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 ZC3H10Q96K80 434 aaKnown RBP13.64□□□□□ -0.23
NUP85-215ENST00000580879 FEM1AQ9BSK4 669 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 RBSNQ9H1K0 784 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 ISCUQ9H1K1 167 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 ARRDC1-AS1Q9H2J1 176 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 PRSS16Q9NQE7 514 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 OR12D3Q9UGF7 316 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 VPS28Q9UK41 221 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 USP18Q9UMW8 372 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 TBC1D30Q9Y2I9 924 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 SPAG17Q6Q759 2223 aa13.64□□□□□ -0.23
NUP85-215ENST00000580879 IGHV1OR15-9A0A0B4J2B8 117 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 TMEM191CA6NGB0 347 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 SIN3BO75182 1162 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 RHOBTB1O94844 696 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 EPN2O95208 641 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 EIF4A3P38919 411 aaKnown RBP13.63□□□□□ -0.23
NUP85-215ENST00000580879 DHPSP49366 369 aaPredicted RBP13.63□□□□□ -0.23
NUP85-215ENST00000580879 PLK1P53350 603 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 ADKP55263 362 aaKnown RBP13.63□□□□□ -0.23
NUP85-215ENST00000580879 OXCT1P55809 520 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 ZNF252P-AS1Q0IIN9 211 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 CAMK2GQ13555 558 aaPredicted RBP13.63□□□□□ -0.23
NUP85-215ENST00000580879 SLC12A1Q13621 1099 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 BYSLQ13895 437 aaKnown RBP13.63□□□□□ -0.23
NUP85-215ENST00000580879 TRIM14Q14142 442 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 PMS2CLQ68D20 193 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 SLFN11Q7Z7L1 901 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 GAS2L3Q86XJ1 694 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 DRC7Q8IY82 874 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 OR7D4Q8NG98 312 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 OR8K1Q8NGG5 319 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 OR2T3Q8NH03 318 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 PRCCQ92733 491 aaPredicted RBP13.63□□□□□ -0.23
NUP85-215ENST00000580879 NTAN1Q96AB6 310 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 SIPA1Q96FS4 1042 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 TRIM5Q9C035 493 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 ZYG11BQ9C0D3 744 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 OSBPL2Q9H1P3 480 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 SMOC1Q9H4F8 434 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 GPATCH2LQ9NWQ4 482 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 OR51B4Q9Y5P0 310 aa13.63□□□□□ -0.23
NUP85-215ENST00000580879 A0A0D9SEW6 157 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 SNAP91O60641 907 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 MFAP3LO75121 409 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 ZNF217O75362 1048 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 LRIG2O94898 1065 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 SRPRAP08240 638 aaKnown RBP13.62□□□□□ -0.23
NUP85-215ENST00000580879 MYBL1P10243 752 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 VAV1P15498 845 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 TGM1P22735 817 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 OR1E1P30953 314 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 HNRNPH3P31942 346 aaKnown RBP13.62□□□□□ -0.23
NUP85-215ENST00000580879 PTGER3P43115 390 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 RPL6Q02878 288 aaKnown RBP13.62□□□□□ -0.23
NUP85-215ENST00000580879 CREB5Q02930 508 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 GFPT1Q06210 699 aaPredicted RBP13.62□□□□□ -0.23
NUP85-215ENST00000580879 HNRNPA1L2Q32P51 320 aaKnown RBP13.62□□□□□ -0.23
NUP85-215ENST00000580879 EFHC2Q5JST6 749 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 CCDC122Q5T0U0 273 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 ACBD5Q5T8D3 534 aaPredicted RBP13.62□□□□□ -0.23
NUP85-215ENST00000580879 MANEALQ5VSG8 457 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 LPCAT2Q7L5N7 544 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 FAM124AQ86V42 546 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 C11orf74Q86VG3 221 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 ARFGAP1Q8N6T3 406 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 TRIM11Q96F44 468 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 PSMB7Q99436 277 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 DNAJC7Q99615 494 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 THAP2Q9H0W7 228 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 NDFIP2Q9NV92 336 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 ZNF212Q9UDV6 495 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 SUN2Q9UH99 717 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 PCSK1NQ9UHG2 260 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 FZD10Q9ULW2 581 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 NEU3Q9UQ49 428 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 SCINQ9Y6U3 715 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 CKAP5Q14008 2032 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 GON4LQ3T8J9 2241 aa13.62□□□□□ -0.23
NUP85-215ENST00000580879 CREB3O43889 395 aa13.61□□□□□ -0.23
NUP85-215ENST00000580879 TPM1P09493 284 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms