RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 RNF219Q5W0B1 726 aaPredicted RBP14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 RAP1GAP2Q684P5 730 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 KIAA0895LQ68EN5 471 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 CXorf57Q6NSI4 855 aaKnown RBP14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 FBXL22Q6P050 247 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 DSG4Q86SJ6 1040 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 ZNF677Q86XU0 584 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 OR2T34Q8NGX1 318 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 PTPRN2Q92932 1015 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 SKA1Q96BD8 255 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 ALG14Q96F25 216 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 SPAG5Q96R06 1193 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 FAM129BQ96TA1 746 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 C6orf106Q9H6K1 298 aaPredicted RBP14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 GAREM1Q9H706 876 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 FAM204AQ9H8W3 233 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 TM9SF3Q9HD45 589 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 ACP6Q9NPH0 428 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 TM7SF3Q9NS93 570 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 FBXL12Q9NXK8 326 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 XPO7Q9UIA9 1087 aaKnown RBP14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 PCOLCE2Q9UKZ9 415 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 STAP1Q9ULZ2 295 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 A0A1W2PPC4 97 aa14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 SH3BP5O60239 455 aa14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 MOCS2O96007 188 aaPredicted RBP14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 IGHV4-34P06331 123 aa14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 USP8P40818 1118 aa14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 GALCP54803 685 aa14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 BNC1Q01954 994 aa14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 AUHQ13825 339 aaKnown RBP14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 HLA-BQ31612 363 aa14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 DPCR1Q3MIW9 517 aa14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 KLHDC7AQ5VTJ3 777 aa14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 SLC47A2Q86VL8 602 aa14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 CFAP52Q8N1V2 620 aa14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 FRS2Q8WU20 508 aa14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 STK33Q9BYT3 514 aa14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 MIR1-1HGQ9H1L0 117 aa14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 NUP62CLQ9H1M0 184 aa14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 ARHGEF38Q9NXL2 777 aa14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 APOBEC2Q9Y235 224 aaKnown RBP14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 HS3ST2Q9Y278 367 aa14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 PCDHB9Q9Y5E1 797 aa14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 OR51B4Q9Y5P0 310 aa14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 TMEM131Q92545 1883 aa14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 TP53BP1Q12888 1972 aaPredicted RBP14.94□□□□□ -0.02
SMARCE1-216ENST00000580419 PTPRBP23467 1997 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 IGLV3-10A0A075B6K4 115 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 YKT6O15498 198 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 LATO43561 262 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 ERBB2P04626 1255 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 UCHL3P15374 230 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 CYP11B1P15538 503 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 SLC8A1P32418 973 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 CLCN6P51797 869 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 CDH4P55283 916 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 PITX1P78337 314 aaPredicted RBP14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 OVGP1Q12889 678 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 SLC25A52Q3SY17 297 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 TCP11X2Q5H9J9 407 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 FAM46CQ5VWP2 391 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 ZNF783Q6ZMS7 281 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 RBM43Q6ZSC3 357 aaKnown RBP14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 FAM183BPQ6ZVS7 135 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 SND1Q7KZF4 910 aaKnown RBP eCLIP14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 BNIPLQ7Z465 357 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 SETD3Q86TU7 594 aaPredicted RBP14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 IQCHQ86VS3 1027 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 APCDD1Q8J025 514 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 ZNF366Q8N895 744 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 MSANTD4Q8NCY6 345 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 ENOX1Q8TC92 643 aaKnown RBP14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 C18orf8Q96DM3 657 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 FEM1AQ9BSK4 669 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 FSCN3Q9NQT6 498 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 SLCO3A1Q9UIG8 710 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 ANKRD6Q9Y2G4 727 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 APC2O95996 2303 aa14.93□□□□□ -0.02
SMARCE1-216ENST00000580419 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 SPAARA0A1B0GVQ0 90 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 DRGXA6NNA5 263 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 CDK4P11802 303 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 MZF1P28698 734 aaPredicted RBP14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 CTSKP43235 329 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 GRK6P43250 576 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 KCNMA1Q12791 1236 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 ZNF177Q13360 481 aaPredicted RBP14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 DRAP1Q14919 205 aaPredicted RBP14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 KIF19Q2TAC6 998 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 INAVAQ3KP66 663 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 OR6B2Q6IFH4 312 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 LRSAM1Q6UWE0 723 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 FAM124AQ86V42 546 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 CREBRFQ8IUR6 639 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 RNF34Q969K3 372 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 ERLEC1Q96DZ1 483 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 RPRD1AQ96P16 312 aaPredicted RBP14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 HAPLN3Q96S86 360 aa14.92□□□□□ -0.02
SMARCE1-216ENST00000580419 NEUROG2Q9H2A3 272 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms