RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 EVA1BQ9NVM1 165 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 ARHGAP20Q9P2F6 1191 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 HESX1Q9UBX0 185 aa9.44□□□□□ -0.9
PTPRM-210ENST00000578916 INTS6Q9UL03 887 aaKnown RBP9.44□□□□□ -0.9
PTPRM-210ENST00000578916 MYLKQ15746 1914 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 ITIH6Q6UXX5 1313 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 YJEFN3A6XGL0 299 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 E7ENQ6 273 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 PRAMEF26H0Y7S4 382 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 TULP2O00295 520 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 PDXKO00764 312 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 XPO1O14980 1071 aaKnown RBP9.43□□□□□ -0.9
PTPRM-210ENST00000578916 CALUO43852 315 aaPredicted RBP9.43□□□□□ -0.9
PTPRM-210ENST00000578916 PPP6R2O75170 966 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 GP1BAP07359 652 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 TRIM49P0CI25 452 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 TRIM49CP0CI26 452 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 KRT13P13646 458 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 SYT1P21579 422 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 DRD3P35462 400 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 NNMTP40261 264 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 RAD23BP54727 409 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 TBX4P57082 545 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 SRSF1Q07955 248 aaKnown RBP eCLIP9.43□□□□□ -0.9
PTPRM-210ENST00000578916 ADIGQ0VDE8 80 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 NFATC3Q12968 1075 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 ELAVL3Q14576 367 aaKnown RBP9.43□□□□□ -0.9
PTPRM-210ENST00000578916 GOLGA7BQ2TAP0 167 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 POM121L1PQ3SYA9 428 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 SETMARQ53H47 684 aaPredicted RBP9.43□□□□□ -0.9
PTPRM-210ENST00000578916 FAM133BQ5BKY9 247 aaKnown RBP9.43□□□□□ -0.9
PTPRM-210ENST00000578916 C3orf38Q5JPI3 329 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 CCDC81Q6ZN84 652 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 MMS22LQ6ZRQ5 1243 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 MAPK15Q8TD08 544 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 AZIN2Q96A70 460 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 RPL10LQ96L21 214 aaKnown RBP9.43□□□□□ -0.9
PTPRM-210ENST00000578916 TRIM4Q9C037 500 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 CISHQ9NSE2 258 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 EXOC1Q9NV70 894 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 KLHL11Q9NVR0 708 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 UCKL1Q9NWZ5 548 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 SLCO3A1Q9UIG8 710 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 SATB2Q9UPW6 733 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 CA5BQ9Y2D0 317 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 COL6A6A6NMZ7 2263 aa9.43□□□□□ -0.9
PTPRM-210ENST00000578916 MAPK13O15264 365 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 SLC7A4O43246 635 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 PLRG1O43660 514 aaKnown RBP9.42□□□□□ -0.9
PTPRM-210ENST00000578916 CUTAO60888 179 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 RNGTTO60942 597 aaKnown RBP9.42□□□□□ -0.9
PTPRM-210ENST00000578916 RTN2O75298 545 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 LUC7L3O95232 432 aaKnown RBP9.42□□□□□ -0.9
PTPRM-210ENST00000578916 IGLV3-27P01718 113 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 PTMAP06454 111 aaKnown RBP9.42□□□□□ -0.9
PTPRM-210ENST00000578916 THEGLP0DJG4 465 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 MYF5P13349 255 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 LCP1P13796 627 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 RPS24P62847 133 aaKnown RBP9.42□□□□□ -0.9
PTPRM-210ENST00000578916 PPP3CAQ08209 521 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 BST2Q10589 180 aaKnown RBP9.42□□□□□ -0.9
PTPRM-210ENST00000578916 KCNMA1Q12791 1236 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 STK4Q13043 487 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 CUL4AQ13619 759 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 ISXQ2M1V0 245 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 C8orf34Q49A92 452 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 FSCBQ5H9T9 825 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 COLEC12Q5KU26 742 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 C6orf132Q5T0Z8 1188 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 FAM46CQ5VWP2 391 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 NADSYN1Q6IA69 706 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 MSANTD2Q6P1R3 559 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 SHC4Q6S5L8 630 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 INTS8Q75QN2 995 aaKnown RBP9.42□□□□□ -0.9
PTPRM-210ENST00000578916 DSG4Q86SJ6 1040 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 TRIM69Q86WT6 500 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 CFAP52Q8N1V2 620 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 KIAA0895Q8NCT3 520 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 PTPRN2Q92932 1015 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 FAXDC2Q96IV6 333 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 APOLD1Q96LR9 279 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 PRICKLE1Q96MT3 831 aaPredicted RBP9.42□□□□□ -0.9
PTPRM-210ENST00000578916 SPAG5Q96R06 1193 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 MYOCQ99972 504 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 KCTD10Q9H3F6 313 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 ZSCAN16Q9H4T2 348 aaPredicted RBP9.42□□□□□ -0.9
PTPRM-210ENST00000578916 USP29Q9HBJ7 922 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 CNGB3Q9NQW8 809 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 NLGN3Q9NZ94 848 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.42□□□□□ -0.9
PTPRM-210ENST00000578916 TSPAN16Q9UKR8 245 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 SSUH2Q9Y2M2 353 aa9.42□□□□□ -0.9
PTPRM-210ENST00000578916 SPTA1P02549 2419 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 NEMP2A6NFY4 417 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 SLC31A1O15431 190 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 PIAS2O75928 621 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 CD19P15391 556 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 VAV1P15498 845 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 STK19P49842 368 aaPredicted RBP9.41□□□□□ -0.9
PTPRM-210ENST00000578916 DAOAP59103 153 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms