RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 ITGA2BP08514 1039 aa14.61□□□□□ -0.07
PPP4R1-206ENST00000577779 CTSOP43234 321 aaPredicted RBP14.61□□□□□ -0.07
PPP4R1-206ENST00000577779 CDKN3Q16667 212 aa14.61□□□□□ -0.07
PPP4R1-206ENST00000577779 PPP1R26Q5T8A7 1209 aaPredicted RBP14.61□□□□□ -0.07
PPP4R1-206ENST00000577779 PIK3R6Q5UE93 754 aa14.61□□□□□ -0.07
PPP4R1-206ENST00000577779 FIBINQ8TAL6 211 aa14.61□□□□□ -0.07
PPP4R1-206ENST00000577779 PARD3BQ8TEW8 1205 aa14.61□□□□□ -0.07
PPP4R1-206ENST00000577779 RNF139Q8WU17 664 aa14.61□□□□□ -0.07
PPP4R1-206ENST00000577779 LMLNQ96KR4 655 aa14.61□□□□□ -0.07
PPP4R1-206ENST00000577779 CLIC6Q96NY7 704 aa14.61□□□□□ -0.07
PPP4R1-206ENST00000577779 MYOCQ99972 504 aa14.61□□□□□ -0.07
PPP4R1-206ENST00000577779 CALN1Q9BXU9 219 aa14.61□□□□□ -0.07
PPP4R1-206ENST00000577779 CAAP1Q9H8G2 361 aa14.61□□□□□ -0.07
PPP4R1-206ENST00000577779 KCNK4Q9NYG8 393 aa14.61□□□□□ -0.07
PPP4R1-206ENST00000577779 SFMBT1Q9UHJ3 866 aa14.61□□□□□ -0.07
PPP4R1-206ENST00000577779 FBXO2Q9UK22 296 aaPredicted RBP14.61□□□□□ -0.07
PPP4R1-206ENST00000577779 INTS6Q9UL03 887 aaKnown RBP14.61□□□□□ -0.07
PPP4R1-206ENST00000577779 CEP83Q9Y592 693 aa14.61□□□□□ -0.07
PPP4R1-206ENST00000577779 RP1P56715 2156 aa14.61□□□□□ -0.07
PPP4R1-206ENST00000577779 ICE1Q9Y2F5 2266 aa14.61□□□□□ -0.07
PPP4R1-206ENST00000577779 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 GOLGA6L7A0A1B0GV03 622 aa14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 SLC7A4O43246 635 aa14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 PLRG1O43660 514 aaKnown RBP14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 RNGTTO60942 597 aaKnown RBP14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 NEBLO76041 1014 aa14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 ZBED1O96006 694 aa14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 ASS1P00966 412 aaKnown RBP14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 CD58P19256 250 aa14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 GJB2P29033 226 aa14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 CLDN10P78369 228 aa14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 ZNF177Q13360 481 aaPredicted RBP14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 ELAVL3Q14576 367 aaKnown RBP14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 RNF219Q5W0B1 726 aaPredicted RBP14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 EFL1Q7Z2Z2 1120 aaKnown RBP14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 BRAPQ7Z569 592 aa14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 TPCN2Q8NHX9 752 aa14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 PSMG3-AS1Q96PY0 264 aa14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 DNAI2Q9GZS0 605 aa14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 SLC25A18Q9H1K4 315 aa14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 SLCO3A1Q9UIG8 710 aa14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 SRPRBQ9Y5M8 271 aaKnown RBP14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 FBN2P35556 2912 aa14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 ITIH6Q6UXX5 1313 aa14.6□□□□□ -0.07
PPP4R1-206ENST00000577779 PRRC2CQ9Y520 2896 aaKnown RBP14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 A0A087X0B3 334 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 CCDC187A0A096LP49 1063 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 CLEC18AA5D8T8 446 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 IRAK2O43187 625 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 MSI1O43347 362 aaKnown RBP14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 TCEA3O75764 348 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 TKTL1P51854 596 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 METAP1P53582 386 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 ECT2LQ008S8 904 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 SRSF6Q13247 344 aaKnown RBP14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 TGIF1Q15583 401 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 TBR1Q16650 682 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 PITRM1Q5JRX3 1037 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 RAB41Q5JT25 222 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 FAM26FQ5R3K3 315 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 ZCCHC8Q6NZY4 707 aaKnown RBP14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 GUSBP11Q6P575 273 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 CRTC1Q6UUV9 634 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 CLEC18BQ6UXF7 455 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 MMS22LQ6ZRQ5 1243 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 PIGZQ86VD9 579 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 CCDC117Q8IWD4 279 aaPredicted RBP14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 CARNMT1Q8N4J0 409 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 TMEM145Q8NBT3 493 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 HJURPQ8NCD3 748 aaPredicted RBP14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 CLEC18CQ8NCF0 446 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 NDRG1Q92597 394 aaKnown RBP14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 EDEM1Q92611 657 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 PTPRN2Q92932 1015 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 FAM131CQ96AQ9 280 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 IRX2Q9BZI1 471 aaPredicted RBP14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 UBXN6Q9BZV1 441 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 DNAJC28Q9NX36 388 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 NCKIPSDQ9NZQ3 722 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 TFIP11Q9UBB9 837 aaKnown RBP14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 CLIC4Q9Y696 253 aa14.59□□□□□ -0.07
PPP4R1-206ENST00000577779 RP1L1Q8IWN7 2480 aaPredicted RBP14.58□□□□□ -0.07
PPP4R1-206ENST00000577779 TYW5A2RUC4 315 aaKnown RBP14.58□□□□□ -0.08
PPP4R1-206ENST00000577779 SLC31A1O15431 190 aa14.58□□□□□ -0.08
PPP4R1-206ENST00000577779 NOBOXO60393 691 aa14.58□□□□□ -0.08
PPP4R1-206ENST00000577779 EIF5BO60841 1220 aaKnown RBP14.58□□□□□ -0.08
PPP4R1-206ENST00000577779 MOCS3O95396 460 aa14.58□□□□□ -0.08
PPP4R1-206ENST00000577779 PRLRP16471 622 aa14.58□□□□□ -0.08
PPP4R1-206ENST00000577779 SLC5A2P31639 672 aa14.58□□□□□ -0.08
PPP4R1-206ENST00000577779 SLC6A4P31645 630 aa14.58□□□□□ -0.08
PPP4R1-206ENST00000577779 PIK3CAP42336 1068 aa14.58□□□□□ -0.08
PPP4R1-206ENST00000577779 SLC11A2P49281 568 aa14.58□□□□□ -0.08
PPP4R1-206ENST00000577779 FOXK1P85037 733 aa14.58□□□□□ -0.08
PPP4R1-206ENST00000577779 CDH18Q13634 790 aa14.58□□□□□ -0.08
PPP4R1-206ENST00000577779 IGFBP7Q16270 282 aa14.58□□□□□ -0.08
PPP4R1-206ENST00000577779 ZACNQ401N2 412 aa14.58□□□□□ -0.08
PPP4R1-206ENST00000577779 FAM133BQ5BKY9 247 aaKnown RBP14.58□□□□□ -0.08
PPP4R1-206ENST00000577779 ZNF542PQ5EBM4 170 aa14.58□□□□□ -0.08
PPP4R1-206ENST00000577779 PM20D1Q6GTS8 502 aa14.58□□□□□ -0.08
PPP4R1-206ENST00000577779 C14orf80Q86SX3 495 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms