RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 SAP25Q8TEE9 199 aa14.67□□□□□ -0.06
SMARCD2-205ENST00000577686 CLEC4CQ8WTT0 213 aa14.67□□□□□ -0.06
SMARCD2-205ENST00000577686 CCDC114Q96M63 670 aa14.67□□□□□ -0.06
SMARCD2-205ENST00000577686 TIGD1Q96MW7 591 aa14.67□□□□□ -0.06
SMARCD2-205ENST00000577686 ORAI3Q9BRQ5 295 aa14.67□□□□□ -0.06
SMARCD2-205ENST00000577686 MTG2Q9H4K7 406 aa14.67□□□□□ -0.06
SMARCD2-205ENST00000577686 THAP9Q9H5L6 903 aa14.67□□□□□ -0.06
SMARCD2-205ENST00000577686 FAM204AQ9H8W3 233 aa14.67□□□□□ -0.06
SMARCD2-205ENST00000577686 EVA1BQ9NVM1 165 aa14.67□□□□□ -0.06
SMARCD2-205ENST00000577686 SERGEFQ9UGK8 458 aa14.67□□□□□ -0.06
SMARCD2-205ENST00000577686 INTS6Q9UL03 887 aaKnown RBP14.67□□□□□ -0.06
SMARCD2-205ENST00000577686 NAALADL1Q9UQQ1 740 aa14.67□□□□□ -0.06
SMARCD2-205ENST00000577686 AK5Q9Y6K8 562 aa14.67□□□□□ -0.06
SMARCD2-205ENST00000577686 SPEGQ15772 3267 aa14.67□□□□□ -0.06
SMARCD2-205ENST00000577686 A0A1B0GVM2 712 aa14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 TRIM49BA6NDI0 452 aa14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 TCAF2A6NFQ2 919 aa14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 ALOX15BO15296 676 aa14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 ZNF18P17022 549 aa14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 RXRGP48443 463 aa14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 YWHAZP63104 245 aaKnown RBP14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 CDK17Q00537 523 aa14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 STAT4Q14765 748 aa14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 SETMARQ53H47 684 aaPredicted RBP14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 KCNT1Q5JUK3 1230 aa14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 FOXR2Q6PJQ5 311 aa14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 STK40Q8N2I9 435 aa14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 EID2Q8N6I1 236 aa14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 MFSD2AQ8NA29 543 aa14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 ADAM32Q8TC27 787 aa14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 ERCC4Q92889 916 aaPredicted RBP14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 NOX5Q96PH1 765 aa14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 NRSN2Q9GZP1 204 aa14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 ZDHHC9Q9Y397 364 aa14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 COL5A1P20908 1838 aaPredicted RBP14.66□□□□□ -0.06
SMARCD2-205ENST00000577686 A0A1W2PR77 199 aa14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 KCNU1A8MYU2 1149 aa14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 PLK4O00444 970 aa14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 LATO43561 262 aa14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 RNGTTO60942 597 aaKnown RBP14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 TRUB2O95900 331 aaKnown RBP14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 CCR1P32246 355 aa14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 GPD2P43304 727 aa14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 RPL34P49207 117 aaKnown RBP14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 ACADVLP49748 655 aa14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 VASPP50552 380 aaPredicted RBP14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 PMS1P54277 932 aaKnown RBP14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 ZC3H12AQ5D1E8 599 aaKnown RBP14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 FSCBQ5H9T9 825 aa14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 HES3Q5TGS1 186 aa14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 RRAGAQ7L523 313 aa14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 AADATQ8N5Z0 425 aa14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 EHBP1Q8NDI1 1231 aa14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 SPATA20Q8TB22 786 aa14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 RPL10LQ96L21 214 aaKnown RBP14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 GDPD2Q9HCC8 539 aa14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.65□□□□□ -0.06
SMARCD2-205ENST00000577686 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 PRAMEF26H0Y7S4 382 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 RNF225M0QZC1 329 aaPredicted RBP14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 THAP12O43422 761 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 AFPP02771 609 aaKnown RBP14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 WNT1P04628 370 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 GLI1P08151 1106 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 PDGFRAP16234 1089 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 CKMT2P17540 419 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 GNA15P30679 374 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 CTSOP43234 321 aaPredicted RBP14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 PLK1P53350 603 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 E2F1Q01094 437 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 ZNF177Q13360 481 aaPredicted RBP14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 ACCSLQ4AC99 568 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 EFHC1Q5JVL4 640 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 KLHL10Q6JEL2 608 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 MMS22LQ6ZRQ5 1243 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 TRIM69Q86WT6 500 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 CCAR2Q8N163 923 aaKnown RBP14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 CACTIN-AS1Q8N1I8 211 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 PTPRN2Q92932 1015 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 RPRD1AQ96P16 312 aaPredicted RBP14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 FAM129BQ96TA1 746 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 ZSWIM1Q9BR11 485 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 SLC4A5Q9BY07 1137 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 PREBQ9HCU5 417 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 DYRK4Q9NR20 520 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 TMEM51Q9NW97 253 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 ASNSD1Q9NWL6 643 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 CYTH4Q9UIA0 394 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 SLCO3A1Q9UIG8 710 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 PTPRBP23467 1997 aa14.64□□□□□ -0.07
SMARCD2-205ENST00000577686 DSPP15924 2871 aaKnown RBP14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 E5RJQ4 531 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 TK2O00142 265 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 PLRG1O43660 514 aaKnown RBP14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 GABBR2O75899 941 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 LETM1O95202 739 aaPredicted RBP14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 FYNP06241 537 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 ALPPL2P10696 532 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 ACTN2P35609 894 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms