RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 RRAGAQ7L523 313 aa12.2□□□□□ -0.46
CDH8-202ENST00000577228 ARHGEF19Q8IW93 802 aa12.2□□□□□ -0.46
CDH8-202ENST00000577228 APCDD1Q8J025 514 aa12.2□□□□□ -0.46
CDH8-202ENST00000577228 ERCC4Q92889 916 aaPredicted RBP12.2□□□□□ -0.46
CDH8-202ENST00000577228 CRELD1Q96HD1 420 aa12.2□□□□□ -0.46
CDH8-202ENST00000577228 RPL10LQ96L21 214 aaKnown RBP12.2□□□□□ -0.46
CDH8-202ENST00000577228 KNTC1P50748 2209 aa12.2□□□□□ -0.46
CDH8-202ENST00000577228 GOLGA6L4A6NEF3 574 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 F5H5T6 163 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 TLR4O00206 839 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 P4HA2O15460 535 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 KRT5P13647 590 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 GPD2P43304 727 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 RPL34P49207 117 aaKnown RBP12.19□□□□□ -0.46
CDH8-202ENST00000577228 ACADVLP49748 655 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 PPP2CBP62714 309 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 PPP2CAP67775 309 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 GCNT1Q02742 428 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 ZC3H12AQ5D1E8 599 aaKnown RBP12.19□□□□□ -0.46
CDH8-202ENST00000577228 HES3Q5TGS1 186 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 SYPL2Q5VXT5 272 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 NAPEPLDQ6IQ20 393 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 DENND1BQ6P3S1 775 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.19□□□□□ -0.46
CDH8-202ENST00000577228 OXR1Q8N573 874 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 LMO3Q8TAP4 145 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 SPATA20Q8TB22 786 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 PIP4K2CQ8TBX8 421 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 PTPRN2Q92932 1015 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 DHTKD1Q96HY7 919 aaPredicted RBP12.19□□□□□ -0.46
CDH8-202ENST00000577228 BTN2A3PQ96KV6 586 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 ASXL3Q9C0F0 2248 aa12.19□□□□□ -0.46
CDH8-202ENST00000577228 TBC1D3DA0A087WVF3 549 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 TBC1D3IA0A087WXS9 549 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 TBC1D3EA0A087X179 549 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 TBC1D3KA0A087X1G2 549 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 TBC1D3FA6NER0 549 aaPredicted RBP12.18□□□□□ -0.46
CDH8-202ENST00000577228 TBC1D3LB9A6J9 549 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 LATO43561 262 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 TRUB2O95900 331 aaKnown RBP12.18□□□□□ -0.46
CDH8-202ENST00000577228 TBC1D3HP0C7X1 549 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 VAV1P15498 845 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 PDGFRAP16234 1089 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 DRD3P35462 400 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 RXRGP48443 463 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 NUMBP49757 651 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 SULT2A1Q06520 285 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 TARDBPQ13148 414 aaKnown RBP eCLIP12.18□□□□□ -0.46
CDH8-202ENST00000577228 SLC12A1Q13621 1099 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 TBC1D3GQ6DHY5 549 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 TBC1D3CQ6IPX1 549 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 DSG4Q86SJ6 1040 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 PRPF39Q86UA1 669 aaKnown RBP12.18□□□□□ -0.46
CDH8-202ENST00000577228 CIR1Q86X95 450 aaPredicted RBP12.18□□□□□ -0.46
CDH8-202ENST00000577228 TBC1D3Q8IZP1 549 aaPredicted RBP12.18□□□□□ -0.46
CDH8-202ENST00000577228 ATP6V0D2Q8N8Y2 350 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 MFSD2AQ8NA29 543 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 TSC1Q92574 1164 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 KREMEN1Q96MU8 473 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 SPAG5Q96R06 1193 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 SLC4A5Q9BY07 1137 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 ERVMER34-1Q9H9K5 563 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 POPDC2Q9HBU9 364 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 SLC12A6Q9UHW9 1150 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 CYTH4Q9UIA0 394 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 HOOK1Q9UJC3 728 aaKnown RBP12.18□□□□□ -0.46
CDH8-202ENST00000577228 AK5Q9Y6K8 562 aa12.18□□□□□ -0.46
CDH8-202ENST00000577228 NYNRINQ9P2P1 1898 aaKnown RBP12.18□□□□□ -0.46
CDH8-202ENST00000577228 LAMA5O15230 3695 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 A0A1B0GVM2 712 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 TCAF2A6NFQ2 919 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 KCNU1A8MYU2 1149 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 E5RJQ4 531 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 SLC7A4O43246 635 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 MED7O43513 233 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 RTN2O75298 545 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 IGLV3-25P01717 112 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
CDH8-202ENST00000577228 ITPKBP27987 946 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 MAT2AP31153 395 aaKnown RBP12.17□□□□□ -0.46
CDH8-202ENST00000577228 NUDT1P36639 197 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 PPP1R2P41236 205 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 METAP1P53582 386 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 OXCT1P55809 520 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 YWHAZP63104 245 aaKnown RBP12.17□□□□□ -0.46
CDH8-202ENST00000577228 SEMG2Q02383 582 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 BNIP3Q12983 259 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 MEA1Q16626 185 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 RABGAP1LQ5R372 815 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 TTC39BQ5VTQ0 682 aaPredicted RBP12.17□□□□□ -0.46
CDH8-202ENST00000577228 SFMBT2Q5VUG0 894 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 FAM46CQ5VWP2 391 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 ISM2Q6H9L7 571 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 KLHL10Q6JEL2 608 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 FBXL19Q6PCT2 694 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 LRRC69Q6ZNQ3 347 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 IQCHQ86VS3 1027 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 SPATS2Q86XZ4 545 aaKnown RBP12.17□□□□□ -0.46
CDH8-202ENST00000577228 CCAR2Q8N163 923 aaKnown RBP12.17□□□□□ -0.46
CDH8-202ENST00000577228 EHBP1Q8NDI1 1231 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms