RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 DMAP1Q9NPF5 467 aaPredicted RBP6.56□□□□□ -1.36
NUP88-212ENST00000576708 FSCN3Q9NQT6 498 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 IL37Q9NZH6 218 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 MBD1Q9UIS9 605 aaPredicted RBP6.56□□□□□ -1.36
NUP88-212ENST00000576708 TPX2Q9ULW0 747 aaKnown RBP6.56□□□□□ -1.36
NUP88-212ENST00000576708 HPSEQ9Y251 543 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 SH3BP1Q9Y3L3 701 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 PCDHGA5Q9Y5G8 931 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 U3KQE9 123 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 SDK1Q7Z5N4 2213 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 ATP8B3O60423 1300 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 ATXN2Q99700 1313 aaKnown RBP6.55□□□□□ -1.36
NUP88-212ENST00000576708 A0A1W2PQH9 124 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 TCRBV21S2A2A0A5A6 115 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 LNP1A1A4G5 178 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 FAM92AA1XBS5 289 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 TBC1D3BA6NDS4 549 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 CALUO43852 315 aaPredicted RBP6.55□□□□□ -1.36
NUP88-212ENST00000576708 FOXD2O60548 495 aaPredicted RBP6.55□□□□□ -1.36
NUP88-212ENST00000576708 TLR5O60602 858 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 KIF20AO95235 890 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 KCNK5O95279 499 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 TOP3BO95985 862 aaKnown RBP6.55□□□□□ -1.36
NUP88-212ENST00000576708 CD58P19256 250 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 ACO1P21399 889 aaKnown RBP6.55□□□□□ -1.36
NUP88-212ENST00000576708 NR2F2P24468 414 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 P2RY2P41231 377 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 GRIA2P42262 883 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 PTGER3P43115 390 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 TNFRSF4P43489 277 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 VAMP7P51809 220 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 AP3M2P53677 418 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 IRX4P78413 519 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 ARID5AQ03989 594 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 CYP27C1Q4G0S4 372 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 C10orf76Q5T2E6 689 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 SNX30Q5VWJ9 437 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 EGFLAMQ63HQ2 1017 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 ATL3Q6DD88 541 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 TPGS1Q6ZTW0 290 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 CLEC20AQ6ZU45 233 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 TOGARAM2Q6ZUX3 1019 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 NLRC3Q7RTR2 1065 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 SCD5Q86SK9 330 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 DDX42Q86XP3 938 aaKnown RBP eCLIP6.55□□□□□ -1.36
NUP88-212ENST00000576708 FAM186BQ8IYM0 893 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 CYB5D2Q8WUJ1 264 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 OVCA2Q8WZ82 227 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 PIGKQ92643 395 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 SEMA4DQ92854 862 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 ANAPC16Q96DE5 110 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 LSM14BQ9BX40 385 aaKnown RBP6.55□□□□□ -1.36
NUP88-212ENST00000576708 SLC6A17Q9H1V8 727 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 CSNK1G1Q9HCP0 422 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 SPHK2Q9NRA0 654 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 TMEM74BQ9NUR3 256 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 PLK2Q9NYY3 685 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 TBC1D14Q9P2M4 693 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 TRAF3IP3Q9Y228 551 aa6.55□□□□□ -1.36
NUP88-212ENST00000576708 MYOFQ9NZM1 2061 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 WASH3PC4AMC7 463 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 PRRT4C9JH25 899 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 NEDD8-MDP1E9PL57 170 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 CDX4O14627 284 aaPredicted RBP6.54□□□□□ -1.36
NUP88-212ENST00000576708 HOXC11O43248 304 aaPredicted RBP6.54□□□□□ -1.36
NUP88-212ENST00000576708 HMBSP08397 361 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 FAM200BP0CF97 657 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 RARGP13631 454 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 P4HA1P13674 534 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 NME1P15531 152 aaKnown RBP6.54□□□□□ -1.36
NUP88-212ENST00000576708 GABRG2P18507 467 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 SPINK2P20155 84 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 PMLP29590 882 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 EIF2DP41214 584 aaKnown RBP6.54□□□□□ -1.36
NUP88-212ENST00000576708 SYKP43405 635 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 NOVA1P51513 510 aaKnown RBP6.54□□□□□ -1.36
NUP88-212ENST00000576708 ST3GAL2Q16842 350 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 UAP1L1Q3KQV9 507 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 EOGTQ5NDL2 527 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 BTBD8Q5XKL5 378 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 KIAA1211LQ6NV74 962 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 HTR3DQ70Z44 454 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 FAM214BQ7L5A3 538 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 UNC93AQ86WB7 457 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 LSRQ86X29 649 aaPredicted RBP6.54□□□□□ -1.36
NUP88-212ENST00000576708 ZNF513Q8N8E2 541 aaPredicted RBP6.54□□□□□ -1.36
NUP88-212ENST00000576708 KIAA1958Q8N8K9 716 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 TERB1Q8NA31 727 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 DNAJB8Q8NHS0 232 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 CCDC26Q8TAB7 109 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 TMEM174Q8WUU8 243 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 NDRG1Q92597 394 aaKnown RBP6.54□□□□□ -1.36
NUP88-212ENST00000576708 TAF4BQ92750 862 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 CYFIP2Q96F07 1278 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 CCDC74BQ96LY2 380 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 HNRNPABQ99729 332 aaKnown RBP6.54□□□□□ -1.36
NUP88-212ENST00000576708 BBS2Q9BXC9 721 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 CD93Q9NPY3 652 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 TLR8Q9NR97 1041 aaKnown RBP6.54□□□□□ -1.36
NUP88-212ENST00000576708 DNAJC17Q9NVM6 304 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms