RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 HOXD12P35452 270 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 SOX5P35711 763 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 PSMD8P48556 350 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 CSNK1EP49674 416 aaKnown RBP12.25□□□□□ -0.45
LITAF-219ENST00000576334 CXCR3P49682 368 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 ATXN3P54252 364 aaPredicted RBP12.25□□□□□ -0.45
LITAF-219ENST00000576334 ST8SIA6P61647 398 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 ZNF252P-AS1Q0IIN9 211 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 FOXC1Q12948 553 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 SEMA3BQ13214 749 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 STX1AQ16623 288 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 POM121L1PQ3SYA9 428 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 KCNT1Q5JUK3 1230 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 WDR45BQ5MNZ6 344 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 ZNF776Q68DI1 518 aaPredicted RBP12.25□□□□□ -0.45
LITAF-219ENST00000576334 CCDC117Q8IWD4 279 aaPredicted RBP12.25□□□□□ -0.45
LITAF-219ENST00000576334 ZNF683Q8IZ20 524 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 AOPEPQ8N6M6 819 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 CADM4Q8NFZ8 388 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 JOSD2Q8TAC2 188 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 GANCQ8TET4 914 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 NT5C3BQ969T7 300 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 BIRC7Q96CA5 298 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 NEUROG2Q9H2A3 272 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 PABPC3Q9H361 631 aaKnown RBP12.25□□□□□ -0.45
LITAF-219ENST00000576334 WDCPQ9H6R7 721 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 METTL5Q9NRN9 209 aaKnown RBP12.25□□□□□ -0.45
LITAF-219ENST00000576334 ARHGEF38Q9NXL2 777 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 MPP6Q9NZW5 540 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 SUN2Q9UH99 717 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 LIMA1Q9UHB6 759 aaKnown RBP12.25□□□□□ -0.45
LITAF-219ENST00000576334 TMEM59LQ9UK28 342 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.25□□□□□ -0.45
LITAF-219ENST00000576334 DOCK9Q9BZ29 2069 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 PCNX2A6NKB5 2137 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 KNL1Q8NG31 2342 aa12.25□□□□□ -0.45
LITAF-219ENST00000576334 A0A1B0GTW7 788 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 A0A1B0GVT2 93 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 RNF103O00237 685 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 BCAT2O15382 392 aaPredicted RBP12.24□□□□□ -0.45
LITAF-219ENST00000576334 SNAP91O60641 907 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 GJB3O75712 270 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 MT-CO1P00395 513 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 CYP1A1P04798 512 aaPredicted RBP12.24□□□□□ -0.45
LITAF-219ENST00000576334 IGHV4-34P06331 123 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 C7P10643 843 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 SLC2A3P11169 496 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 MAP1BP46821 2468 aaKnown RBP12.24□□□□□ -0.45
LITAF-219ENST00000576334 ATP11AP98196 1134 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 MYL5Q02045 173 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 DEUP1Q05D60 604 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 TYRO3Q06418 890 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 CST6Q15828 149 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 C15orf59Q2T9L4 293 aaPredicted RBP12.24□□□□□ -0.45
LITAF-219ENST00000576334 RABGAP1LQ5R372 815 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 RNF219Q5W0B1 726 aaPredicted RBP12.24□□□□□ -0.45
LITAF-219ENST00000576334 TFAP2DQ7Z6R9 452 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 PIP4P1Q86T03 277 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 FAM131BQ86XD5 332 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 AADATQ8N5Z0 425 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 FRS2Q8WU20 508 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 PCMTD1Q96MG8 357 aaPredicted RBP12.24□□□□□ -0.45
LITAF-219ENST00000576334 C11orf70Q9BRQ4 267 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 ORAI3Q9BRQ5 295 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 FEM1AQ9BSK4 669 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 BTBD1Q9H0C5 482 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 EBF2Q9HAK2 575 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 ANO10Q9NW15 660 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 FBXL12Q9NXK8 326 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 SARDHQ9UL12 918 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 OR51B4Q9Y5P0 310 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 CEP295Q9C0D2 2601 aa12.24□□□□□ -0.45
LITAF-219ENST00000576334 ITIH6Q6UXX5 1313 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.23□□□□□ -0.45
LITAF-219ENST00000576334 EDDM13A0A1B0GTR0 161 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 LGALS16A8MUM7 142 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 K7ERQ8 282 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 WNT9AO14904 365 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 TEX33O43247 280 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 BNIP3LO60238 219 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 SH3BP5O60239 455 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 OPHN1O60890 802 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 SRGAP2O75044 1071 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 RNASEH2AO75792 299 aaKnown RBP12.23□□□□□ -0.45
LITAF-219ENST00000576334 MOCS3O95396 460 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 SRPRAP08240 638 aaKnown RBP12.23□□□□□ -0.45
LITAF-219ENST00000576334 CEACAM1P13688 526 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 GNSP15586 552 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 CSRP1P21291 193 aaKnown RBP12.23□□□□□ -0.45
LITAF-219ENST00000576334 GLDCP23378 1020 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 SLC8A1P32418 973 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 DPP6P42658 865 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 PLK1P53350 603 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 CDR2Q01850 454 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 UBXN1Q04323 297 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 ZNF177Q13360 481 aaPredicted RBP12.23□□□□□ -0.45
LITAF-219ENST00000576334 E2F5Q15329 346 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 CDO1Q16878 200 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 SLC25A52Q3SY17 297 aa12.23□□□□□ -0.45
LITAF-219ENST00000576334 FKBP15Q5T1M5 1219 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms