RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 BOLA3Q53S33 107 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 CXorf57Q6NSI4 855 aaKnown RBP15.63■□□□□ 0.09
LITAF-217ENST00000575426 TMEM92Q6UXU6 159 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 WDR5BQ86VZ2 330 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 PSTKQ8IV42 348 aaKnown RBP15.63■□□□□ 0.09
LITAF-217ENST00000575426 APCDD1Q8J025 514 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 PYROXD2Q8N2H3 581 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 NIPA2Q8N8Q9 360 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 SLC35G2Q8TBE7 412 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 EIF3CQ99613 913 aaKnown RBP15.63■□□□□ 0.09
LITAF-217ENST00000575426 BAG1Q99933 345 aaPredicted RBP15.63■□□□□ 0.09
LITAF-217ENST00000575426 MAGEB5Q9BZ81 275 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 DHX35Q9H5Z1 703 aaKnown RBP15.63■□□□□ 0.09
LITAF-217ENST00000575426 CATSPERBQ9H7T0 1116 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 FAM86C1Q9NVL1 165 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 DONSONQ9NYP3 566 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 SUN2Q9UH99 717 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 SLC25A13Q9UJS0 675 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 VPS28Q9UK41 221 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 INTS6Q9UL03 887 aaKnown RBP15.63■□□□□ 0.09
LITAF-217ENST00000575426 ERVW-1Q9UQF0 538 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 CHD5Q8TDI0 1954 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 MUC6Q6W4X9 2439 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 CCDC163A0A0D9SF12 145 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 TCRBV21S2A2A0A5A6 115 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 FAM72CH0Y354 149 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 AXIN1O15169 862 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 DAPK3O43293 454 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 EPHX1P07099 455 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 CHRM1P11229 460 aaPredicted RBP15.62■□□□□ 0.09
LITAF-217ENST00000575426 EPHB2P29323 1055 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 HTR7P34969 479 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 CNR2P34972 360 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 PXNP49023 591 aaPredicted RBP15.62■□□□□ 0.09
LITAF-217ENST00000575426 MAPKAPK2P49137 400 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 GSDMDP57764 484 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 TPI1P60174 286 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 NHLH1Q02575 133 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 FAM72AQ5TYM5 149 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 MANEALQ5VSG8 457 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 ANO7Q6IWH7 933 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 FAM72DQ6L9T8 149 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 ZNF783Q6ZMS7 281 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 FAM72BQ86X60 149 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 ARFGAP1Q8N6T3 406 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 FEM1AQ9BSK4 669 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 SNRNP25Q9BV90 132 aaKnown RBP15.62■□□□□ 0.09
LITAF-217ENST00000575426 ZWILCHQ9H900 591 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 GPATCH2LQ9NWQ4 482 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 EBF1Q9UH73 591 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 PCDHA13Q9Y5I0 950 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 EPN1Q9Y6I3 576 aaPredicted RBP15.62■□□□□ 0.09
LITAF-217ENST00000575426 R4GN57 208 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 WDFY4Q6ZS81 3184 aa15.62■□□□□ 0.09
LITAF-217ENST00000575426 CEP192Q8TEP8 1941 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 ILVBLA1L0T0 632 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 SOWAHDA6NJG2 315 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 NDUFA10O95299 355 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 LCA5LO95447 670 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 FECHP22830 423 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 ETFBP38117 255 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 ARHGAP25P42331 645 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 NOP2P46087 812 aaKnown RBP15.61■□□□□ 0.09
LITAF-217ENST00000575426 ZNF135P52742 658 aaPredicted RBP15.61■□□□□ 0.09
LITAF-217ENST00000575426 DMWDQ09019 674 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 ENPP2Q13822 863 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 MESDQ14696 234 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 PPP6R3Q5H9R7 873 aaPredicted RBP15.61■□□□□ 0.09
LITAF-217ENST00000575426 KDM1BQ8NB78 822 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 ZBTB44Q8NCP5 570 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 HMGB4Q8WW32 186 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 RFFLQ8WZ73 363 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 HSPH1Q92598 858 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 NELL1Q92832 810 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 ERLEC1Q96DZ1 483 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 PEBP4Q96S96 227 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 SPON2Q9BUD6 331 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 C2orf49Q9BVC5 232 aaPredicted RBP15.61■□□□□ 0.09
LITAF-217ENST00000575426 SEMA4AQ9H3S1 761 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 GRPEL1Q9HAV7 217 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 TMEM248Q9NWD8 314 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 DNAI1Q9UI46 699 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 HPCAL4Q9UM19 191 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 RAD54BQ9Y620 910 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 SPAG17Q6Q759 2223 aa15.61■□□□□ 0.09
LITAF-217ENST00000575426 NYNRINQ9P2P1 1898 aaKnown RBP15.61■□□□□ 0.09
LITAF-217ENST00000575426 MUC22E2RYF6 1773 aaPredicted RBP15.6■□□□□ 0.09
LITAF-217ENST00000575426 TMEM110-MUSTN1A8MSY1 372 aa15.6■□□□□ 0.09
LITAF-217ENST00000575426 EEF2KO00418 725 aaKnown RBP15.6■□□□□ 0.09
LITAF-217ENST00000575426 FGF10O15520 208 aaPredicted RBP15.6■□□□□ 0.09
LITAF-217ENST00000575426 PROSCO94903 275 aa15.6■□□□□ 0.09
LITAF-217ENST00000575426 HLA-EP13747 358 aa15.6■□□□□ 0.09
LITAF-217ENST00000575426 PRKCHP24723 683 aa15.6■□□□□ 0.09
LITAF-217ENST00000575426 ARL4AP40617 200 aa15.6■□□□□ 0.09
LITAF-217ENST00000575426 NBL1P41271 181 aa15.6■□□□□ 0.09
LITAF-217ENST00000575426 NUMBP49757 651 aa15.6■□□□□ 0.09
LITAF-217ENST00000575426 GNA12Q03113 381 aa15.6■□□□□ 0.09
LITAF-217ENST00000575426 BYSLQ13895 437 aaKnown RBP15.6■□□□□ 0.09
LITAF-217ENST00000575426 PTPRNQ16849 979 aa15.6■□□□□ 0.09
LITAF-217ENST00000575426 USP39Q53GS9 565 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms