RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 PCDHGA1Q9Y5H4 931 aa10.79□□□□□ -0.68
TVP23B-208ENST00000575261 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.79□□□□□ -0.68
TVP23B-208ENST00000575261 KALRNO60229 2985 aa10.79□□□□□ -0.68
TVP23B-208ENST00000575261 A0A1B0GVM2 712 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 FAM149AA5PLN7 773 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 TRABD2BA6NFA1 517 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 TCAF2A6NFQ2 919 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 C10orf142B7Z368 130 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 E9PAM4 449 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 ENC1O14682 589 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 LETM1O95202 739 aaPredicted RBP10.78□□□□□ -0.68
TVP23B-208ENST00000575261 TRUB2O95900 331 aaKnown RBP10.78□□□□□ -0.68
TVP23B-208ENST00000575261 IL1BP01584 269 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 WNT1P04628 370 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 ITGAVP06756 1048 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 CDK4P11802 303 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 GOT1P17174 413 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 HNF1BP35680 557 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 ARRB1P49407 418 aaPredicted RBP10.78□□□□□ -0.68
TVP23B-208ENST00000575261 STK19P49842 368 aaPredicted RBP10.78□□□□□ -0.68
TVP23B-208ENST00000575261 OXCT1P55809 520 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 MARSP56192 900 aaKnown RBP10.78□□□□□ -0.68
TVP23B-208ENST00000575261 YWHAZP63104 245 aaKnown RBP10.78□□□□□ -0.68
TVP23B-208ENST00000575261 SULT2A1Q06520 285 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 PDCLQ13371 301 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 CAMK2BQ13554 666 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 KCNJ12Q14500 433 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 SLC45A4Q5BKX6 768 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 ZC3H12AQ5D1E8 599 aaKnown RBP10.78□□□□□ -0.68
TVP23B-208ENST00000575261 RABGAP1LQ5R372 815 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 DENND1BQ6P3S1 775 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 ENOSF1Q7L5Y1 443 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 DSG4Q86SJ6 1040 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 TMPRSS12Q86WS5 348 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 MARCH9Q86YJ5 346 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 GATAD2AQ86YP4 633 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 APCDD1Q8J025 514 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 STK40Q8N2I9 435 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 OXR1Q8N573 874 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 PDCD7Q8N8D1 485 aaKnown RBP10.78□□□□□ -0.68
TVP23B-208ENST00000575261 ATP6V0D2Q8N8Y2 350 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 OR14C36Q8NHC7 312 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 PTPRN2Q92932 1015 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 SERAC1Q96JX3 654 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 RPL10LQ96L21 214 aaKnown RBP10.78□□□□□ -0.68
TVP23B-208ENST00000575261 SPAG5Q96R06 1193 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 FAM129BQ96TA1 746 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 SLC4A5Q9BY07 1137 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 THAP9Q9H5L6 903 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 FAM204AQ9H8W3 233 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 EBF2Q9HAK2 575 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.78□□□□□ -0.68
TVP23B-208ENST00000575261 SLC12A6Q9UHW9 1150 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 SLCO3A1Q9UIG8 710 aa10.78□□□□□ -0.68
TVP23B-208ENST00000575261 A0A1W2PR77 199 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 KCNU1A8MYU2 1149 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 PPP1R3GB7ZBB8 358 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 THAP12O43422 761 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 LATO43561 262 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 RFPL3O75679 317 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 LDOC1O95751 146 aaPredicted RBP10.77□□□□□ -0.69
TVP23B-208ENST00000575261 SLC2A3P11169 496 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 PDGFRAP16234 1089 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 EPHA8P29322 1005 aaPredicted RBP10.77□□□□□ -0.69
TVP23B-208ENST00000575261 CCR1P32246 355 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 PPP2CBP62714 309 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 PPP2CAP67775 309 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 CYP4F3Q08477 520 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 PAK1Q13153 545 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 MTA1Q13330 715 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 TMEM110Q86TL2 294 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 CIR1Q86X95 450 aaPredicted RBP10.77□□□□□ -0.69
TVP23B-208ENST00000575261 CCAR2Q8N163 923 aaKnown RBP10.77□□□□□ -0.69
TVP23B-208ENST00000575261 SAP25Q8TEE9 199 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 HNRNPLLQ8WVV9 542 aaKnown RBP10.77□□□□□ -0.69
TVP23B-208ENST00000575261 ZNF606Q8WXB4 792 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 OR8D1Q8WZ84 308 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 NXPE2Q96DL1 559 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 CNDP2Q96KP4 475 aaKnown RBP10.77□□□□□ -0.69
TVP23B-208ENST00000575261 FAM81BQ96LP2 452 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 PPP1R9BQ96SB3 815 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 KDM4CQ9H3R0 1056 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 UBE2TQ9NPD8 197 aaPredicted RBP10.77□□□□□ -0.69
TVP23B-208ENST00000575261 DDIT4Q9NX09 232 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 CYTH4Q9UIA0 394 aa10.77□□□□□ -0.69
TVP23B-208ENST00000575261 URB1O60287 2271 aaKnown RBP10.76□□□□□ -0.69
TVP23B-208ENST00000575261 A0A087WV48 116 aa10.76□□□□□ -0.69
TVP23B-208ENST00000575261 TBC1D3DA0A087WVF3 549 aa10.76□□□□□ -0.69
TVP23B-208ENST00000575261 TBC1D3IA0A087WXS9 549 aa10.76□□□□□ -0.69
TVP23B-208ENST00000575261 TBC1D3EA0A087X179 549 aa10.76□□□□□ -0.69
TVP23B-208ENST00000575261 TBC1D3KA0A087X1G2 549 aa10.76□□□□□ -0.69
TVP23B-208ENST00000575261 TBC1D3FA6NER0 549 aaPredicted RBP10.76□□□□□ -0.69
TVP23B-208ENST00000575261 TBC1D3LB9A6J9 549 aa10.76□□□□□ -0.69
TVP23B-208ENST00000575261 C1QTNF3-AMACRE9PGA6 284 aa10.76□□□□□ -0.69
TVP23B-208ENST00000575261 TLR4O00206 839 aa10.76□□□□□ -0.69
TVP23B-208ENST00000575261 SLC7A4O43246 635 aa10.76□□□□□ -0.69
TVP23B-208ENST00000575261 MAGEC1O60732 1142 aa10.76□□□□□ -0.69
TVP23B-208ENST00000575261 HSF2BPO75031 334 aa10.76□□□□□ -0.69
TVP23B-208ENST00000575261 FGFR1OPO95684 399 aaKnown RBP10.76□□□□□ -0.69
TVP23B-208ENST00000575261 GLI1P08151 1106 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms