RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 TRMT11Q7Z4G4 463 aaKnown RBP16.27■□□□□ 0.2
CHD3-215ENST00000572750 KCNV2Q8TDN2 545 aa16.27■□□□□ 0.2
CHD3-215ENST00000572750 CTTNBP2NLQ9P2B4 639 aa16.27■□□□□ 0.2
CHD3-215ENST00000572750 PCSK1NQ9UHG2 260 aa16.27■□□□□ 0.2
CHD3-215ENST00000572750 INTS6Q9UL03 887 aaKnown RBP16.27■□□□□ 0.2
CHD3-215ENST00000572750 FZD10Q9ULW2 581 aa16.27■□□□□ 0.2
CHD3-215ENST00000572750 RAD54BQ9Y620 910 aa16.27■□□□□ 0.2
CHD3-215ENST00000572750 CKAP5Q14008 2032 aa16.27■□□□□ 0.2
CHD3-215ENST00000572750 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.26■□□□□ 0.19
CHD3-215ENST00000572750 DRGXA6NNA5 263 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 WASH3PC4AMC7 463 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 CLDN11O75508 207 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 RNF8O76064 485 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 LRIG2O94898 1065 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 ADRB1P08588 477 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 TMEM253P0C7T8 217 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 FECHP22830 423 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 MZF1P28698 734 aaPredicted RBP16.26■□□□□ 0.19
CHD3-215ENST00000572750 MIPP30301 263 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 NTSR1P30989 418 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 IL12RB1P42701 662 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 CDH4P55283 916 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 NRG1Q02297 640 aaPredicted RBP16.26■□□□□ 0.19
CHD3-215ENST00000572750 ZNF177Q13360 481 aaPredicted RBP16.26■□□□□ 0.19
CHD3-215ENST00000572750 ZNF234Q14588 700 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 CRY1Q16526 586 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 PTPRNQ16849 979 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 ZNF528Q3MIS6 628 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 ACBD5Q5T8D3 534 aaPredicted RBP16.26■□□□□ 0.19
CHD3-215ENST00000572750 RWDD4Q6NW29 188 aaKnown RBP16.26■□□□□ 0.19
CHD3-215ENST00000572750 CYP4V2Q6ZWL3 525 aaPredicted RBP16.26■□□□□ 0.19
CHD3-215ENST00000572750 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.26■□□□□ 0.19
CHD3-215ENST00000572750 CPNE8Q86YQ8 564 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 APCDD1Q8J025 514 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 TSTD1Q8NFU3 115 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 UCMAQ8WVF2 138 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 SNRNP25Q9BV90 132 aaKnown RBP16.26■□□□□ 0.19
CHD3-215ENST00000572750 ZYG11BQ9C0D3 744 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 OSBPL2Q9H1P3 480 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 OSGEPQ9NPF4 335 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 KIAA1522Q9P206 1035 aaPredicted RBP16.26■□□□□ 0.19
CHD3-215ENST00000572750 THAP10Q9P2Z0 257 aaPredicted RBP16.26■□□□□ 0.19
CHD3-215ENST00000572750 AP4E1Q9UPM8 1137 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 STON1Q9Y6Q2 735 aa16.26■□□□□ 0.19
CHD3-215ENST00000572750 PRPSAP2O60256 369 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 APBB3O95704 486 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 RHOCP08134 193 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 POLR2EP19388 210 aaKnown RBP16.25■□□□□ 0.19
CHD3-215ENST00000572750 PRKCHP24723 683 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 CTSOP43234 321 aaPredicted RBP16.25■□□□□ 0.19
CHD3-215ENST00000572750 FNTBP49356 437 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 AIF1P55008 147 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 CA9Q16790 459 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 SMTNL2Q2TAL5 461 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 PLEKHG6Q3KR16 790 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 FNDC3BQ53EP0 1204 aaKnown RBP16.25■□□□□ 0.19
CHD3-215ENST00000572750 ANO7Q6IWH7 933 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 KIAA1211LQ6NV74 962 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 SERPINA13PQ6UXR4 307 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 ZNF366Q8N895 744 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 NIPA2Q8N8Q9 360 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 TBC1D31Q96DN5 1066 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 GABRG3Q99928 467 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 IMPACTQ9P2X3 320 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 UVRAGQ9P2Y5 699 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 PPARGC1AQ9UBK2 798 aaKnown RBP16.25■□□□□ 0.19
CHD3-215ENST00000572750 ZNF212Q9UDV6 495 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 IP6K2Q9UHH9 426 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 USP18Q9UMW8 372 aa16.25■□□□□ 0.19
CHD3-215ENST00000572750 A0A1W2PQF6 199 aa16.24■□□□□ 0.19
CHD3-215ENST00000572750 TCRBV21S2A2A0A5A6 115 aa16.24■□□□□ 0.19
CHD3-215ENST00000572750 CREB3O43889 395 aa16.24■□□□□ 0.19
CHD3-215ENST00000572750 MOCS3O95396 460 aa16.24■□□□□ 0.19
CHD3-215ENST00000572750 DLDP09622 509 aaKnown RBP16.24■□□□□ 0.19
CHD3-215ENST00000572750 HLA-EP13747 358 aa16.24■□□□□ 0.19
CHD3-215ENST00000572750 TGM1P22735 817 aa16.24■□□□□ 0.19
CHD3-215ENST00000572750 IL1R2P27930 398 aa16.24■□□□□ 0.19
CHD3-215ENST00000572750 OR1E1P30953 314 aa16.24■□□□□ 0.19
CHD3-215ENST00000572750 DGKEP52429 567 aa16.24■□□□□ 0.19
CHD3-215ENST00000572750 SEMA3BQ13214 749 aa16.24■□□□□ 0.19
CHD3-215ENST00000572750 PIGHQ14442 188 aaPredicted RBP16.24■□□□□ 0.19
CHD3-215ENST00000572750 RNF219Q5W0B1 726 aaPredicted RBP16.24■□□□□ 0.19
CHD3-215ENST00000572750 MDGA1Q8NFP4 955 aa16.24■□□□□ 0.19
CHD3-215ENST00000572750 NELL1Q92832 810 aa16.24■□□□□ 0.19
CHD3-215ENST00000572750 MUC3BQ9H195 1237 aa16.24■□□□□ 0.19
CHD3-215ENST00000572750 DHX35Q9H5Z1 703 aaKnown RBP16.24■□□□□ 0.19
CHD3-215ENST00000572750 ZSCAN32Q9NX65 697 aa16.24■□□□□ 0.19
CHD3-215ENST00000572750 TFR2Q9UP52 801 aa16.24■□□□□ 0.19
CHD3-215ENST00000572750 TBC1D30Q9Y2I9 924 aa16.24■□□□□ 0.19
CHD3-215ENST00000572750 GCN1Q92616 2671 aaKnown RBP16.23■□□□□ 0.19
CHD3-215ENST00000572750 A0A0D9SEW6 157 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 TMEM110-MUSTN1A8MSY1 372 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 GOLGA6L6A8MZA4 724 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 MYO1FO00160 1098 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 TIMM44O43615 452 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 LCA5LO95447 670 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 ATP5BP06576 529 aaKnown RBP16.23■□□□□ 0.19
CHD3-215ENST00000572750 L1CAMP32004 1257 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 PCK1P35558 622 aa16.23■□□□□ 0.19
CHD3-215ENST00000572750 CYLC1P35663 651 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms