RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 ITPKBP27987 946 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 MZF1P28698 734 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 NUDT1P36639 197 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 NNMTP40261 264 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 GPD2P43304 727 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 ACADSBP45954 432 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 PPP2CBP62714 309 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 PPP2CAP67775 309 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 NUCB2P80303 420 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 SEMG2Q02383 582 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 CETN1Q12798 172 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 BNIP3Q12983 259 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 RTP5Q14D33 572 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 ZC3H12AQ5D1E8 599 aaKnown RBP10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 HES3Q5TGS1 186 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 SFMBT2Q5VUG0 894 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 SYPL2Q5VXT5 272 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 RAP1GAP2Q684P5 730 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 TBC1D3GQ6DHY5 549 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 TBC1D3CQ6IPX1 549 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 NAPEPLDQ6IQ20 393 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 FBXL19Q6PCT2 694 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 PRPF39Q86UA1 669 aaKnown RBP10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 TAC4Q86UU9 113 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 IQCHQ86VS3 1027 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 CHSY1Q86X52 802 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 TBC1D3Q8IZP1 549 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 LMO3Q8TAP4 145 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 KAT5Q92993 513 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 FAM131CQ96AQ9 280 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 FAM149B1Q96BN6 582 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 BTN2A3PQ96KV6 586 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 SPAG5Q96R06 1193 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 KDM4CQ9H3R0 1056 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 ST7Q9NRC1 585 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 ARHGAP20Q9P2F6 1191 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 TJP2Q9UDY2 1190 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 XPO7Q9UIA9 1087 aaKnown RBP10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 APC2O95996 2303 aa10.19□□□□□ -0.78
TRAPPC1-205ENST00000572656 MYH10P35580 1976 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 CAPN9O14815 690 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 RRP8O43159 456 aaKnown RBP10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 SLC7A4O43246 635 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 TLX3O43711 291 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 MAGEC1O60732 1142 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 CKMT2P17540 419 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 DRD3P35462 400 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 STK19P49842 368 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 VASPP50552 380 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 GCNT1Q02742 428 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 SULT2A1Q06520 285 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 C19orf57Q0VDD7 668 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 OVGP1Q12889 678 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 RRAGAQ7L523 313 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 KANSL1Q7Z3B3 1105 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 DSG4Q86SJ6 1040 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 SPATS2Q86XZ4 545 aaKnown RBP10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 FMR1NBQ8N0W7 255 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 CACTIN-AS1Q8N1I8 211 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 SNIP1Q8TAD8 396 aaKnown RBP10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 SPATA20Q8TB22 786 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 STK32AQ8WU08 396 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 FRS2Q8WU20 508 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 RFFLQ8WZ73 363 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 CEP63Q96MT8 703 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 PRORYQ9H606 182 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 POPDC2Q9HBU9 364 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 SLC12A6Q9UHW9 1150 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 CYTH4Q9UIA0 394 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 CNTN6Q9UQ52 1028 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 DMTF1Q9Y222 760 aa10.18□□□□□ -0.78
TRAPPC1-205ENST00000572656 PTPRBP23467 1997 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 KCNU1A8MYU2 1149 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 F5H5T6 163 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 PSMA7O14818 248 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 ATXN7O15265 892 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 PLRG1O43660 514 aaKnown RBP10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 RTN2O75298 545 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 TRUB2O95900 331 aaKnown RBP10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 IGLV3-25P01717 112 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 VAV1P15498 845 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 PDGFRAP16234 1089 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 ACP1P24666 158 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 PLK1P53350 603 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 METAP1P53582 386 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 OXCT1P55809 520 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 YWHAZP63104 245 aaKnown RBP10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 EIF4EBP2Q13542 120 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 STIM1Q13586 685 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 STAT4Q14765 748 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 MEA1Q16626 185 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 CCDC40Q4G0X9 1142 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 TTC39BQ5VTQ0 682 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 FAM46CQ5VWP2 391 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 DENND1BQ6P3S1 775 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 TMEM110Q86TL2 294 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 TRIM69Q86WT6 500 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 ARHGEF19Q8IW93 802 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 CCAR2Q8N163 923 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms