RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 ADORA2BP29275 332 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 HOXC12P31275 282 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 LHX1P48742 406 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 CDH8P55286 799 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 MYL6P60660 151 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 IRX4P78413 519 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 SMARCB1Q12824 385 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 TRPC3Q13507 836 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 GRM3Q14832 879 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 ODF1Q14990 250 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 GAB4Q2WGN9 574 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 ZNF699Q32M78 642 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 WDR72Q3MJ13 1102 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 USP39Q53GS9 565 aaKnown RBP6.63□□□□□ -1.35
PRPF8-204ENST00000572445 LY6G5CQ5SRR4 150 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 HP1BP3Q5SSJ5 553 aaPredicted RBP6.63□□□□□ -1.35
PRPF8-204ENST00000572445 DAB2IPQ5VWQ8 1189 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 PMS2CLQ68D20 193 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 KIAA1324Q6UXG2 1013 aaKnown RBP6.63□□□□□ -1.35
PRPF8-204ENST00000572445 UNQ6494/PRO21346Q6UXR6 183 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 CCDC73Q6ZRK6 1079 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 TPGS1Q6ZTW0 290 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 EPM2AIP1Q7L775 607 aaPredicted RBP6.63□□□□□ -1.35
PRPF8-204ENST00000572445 SYT13Q7L8C5 426 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 LRRC52Q8N7C0 313 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 KNL1Q8NG31 2342 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 SCAMP5Q8TAC9 235 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 SPATA18Q8TC71 538 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 EXOC4Q96A65 974 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 CGRRF1Q99675 332 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 RNF38Q9H0F5 515 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 EMC7Q9NPA0 242 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 SPTLC3Q9NUV7 552 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 SEL1LQ9UBV2 794 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 HMGXB4Q9UGU5 601 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 CDH9Q9ULB4 789 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 ARHGAP26Q9UNA1 814 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 COQ6Q9Y2Z9 468 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 FHOD1Q9Y613 1164 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 STYXL1Q9Y6J8 313 aa6.63□□□□□ -1.35
PRPF8-204ENST00000572445 TBC1D3BA6NDS4 549 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 ZNF233A6NK53 670 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 M0R082 166 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 CYP26A1O43174 497 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 HMBSP08397 361 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 HOXB2P14652 356 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 SNRPBP14678 240 aaKnown RBP6.62□□□□□ -1.35
PRPF8-204ENST00000572445 SYT1P21579 422 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 WARSP23381 471 aaKnown RBP6.62□□□□□ -1.35
PRPF8-204ENST00000572445 CD68P34810 354 aaPredicted RBP6.62□□□□□ -1.35
PRPF8-204ENST00000572445 GNL1P36915 607 aaPredicted RBP6.62□□□□□ -1.35
PRPF8-204ENST00000572445 ATXN3P54252 364 aaPredicted RBP6.62□□□□□ -1.35
PRPF8-204ENST00000572445 MLLT6P55198 1093 aaPredicted RBP6.62□□□□□ -1.35
PRPF8-204ENST00000572445 SIM1P81133 766 aaPredicted RBP6.62□□□□□ -1.35
PRPF8-204ENST00000572445 GUCY1A3Q02108 690 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 CYP24A1Q07973 514 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 ZNF268Q14587 947 aaPredicted RBP6.62□□□□□ -1.35
PRPF8-204ENST00000572445 SNRNP35Q16560 246 aaKnown RBP6.62□□□□□ -1.35
PRPF8-204ENST00000572445 FBXO43Q4G163 708 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 ATP13A4Q4VNC1 1196 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 FAM26FQ5R3K3 315 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 LYSMD4Q5XG99 296 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 SPOPLQ6IQ16 392 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 C1orf229Q6ZS94 237 aaPredicted RBP6.62□□□□□ -1.35
PRPF8-204ENST00000572445 LPCAT2Q7L5N7 544 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 TRAPPC11Q7Z392 1133 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 ACOT1Q86TX2 421 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 BBS7Q8IWZ6 715 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 IL17RCQ8NAC3 791 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 B3GALNT2Q8NCR0 500 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 ZNF417Q8TAU3 575 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 CXorf38Q8TB03 319 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 WHAMMQ8TF30 809 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 CHTF18Q8WVB6 975 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 NANOS1Q8WY41 292 aaKnown RBP6.62□□□□□ -1.35
PRPF8-204ENST00000572445 SNX19Q92543 992 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 TRMT2BQ96GJ1 504 aaKnown RBP6.62□□□□□ -1.35
PRPF8-204ENST00000572445 LOXL4Q96JB6 756 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 SLITRK1Q96PX8 696 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 TSPAN18Q96SJ8 248 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 ZNF587Q96SQ5 575 aaPredicted RBP6.62□□□□□ -1.35
PRPF8-204ENST00000572445 KCNK16Q96T55 309 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 ACOX2Q99424 681 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 MCMBPQ9BTE3 642 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 SARGQ9BW04 601 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 SCNM1Q9BWG6 230 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 LSM14BQ9BX40 385 aaKnown RBP6.62□□□□□ -1.35
PRPF8-204ENST00000572445 TMPRSS13Q9BYE2 586 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 B3GNT5Q9BYG0 378 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 PRDM14Q9GZV8 571 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 ST6GALNAC4Q9H4F1 302 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 TCF7L1Q9HCS4 588 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 SLC39A2Q9NP94 309 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 AGPAT3Q9NRZ7 376 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 TMEM74BQ9NUR3 256 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 DNAJC17Q9NVM6 304 aaKnown RBP6.62□□□□□ -1.35
PRPF8-204ENST00000572445 GFOD1Q9NXC2 390 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 PLK2Q9NYY3 685 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 H2AFY2Q9P0M6 372 aaPredicted RBP6.62□□□□□ -1.35
PRPF8-204ENST00000572445 CALCOCO1Q9P1Z2 691 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms