RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 IGSF9Q9P2J2 1179 aa17.78■□□□□ 0.44
RPAIN-208ENST00000571043 TBK1Q9UHD2 729 aa17.78■□□□□ 0.44
RPAIN-208ENST00000571043 SZT2Q5T011 3432 aa17.78■□□□□ 0.44
RPAIN-208ENST00000571043 GREB1Q4ZG55 1949 aa17.78■□□□□ 0.44
RPAIN-208ENST00000571043 SOX1O00570 391 aaPredicted RBP17.77■□□□□ 0.44
RPAIN-208ENST00000571043 TGM5O43548 720 aa17.77■□□□□ 0.44
RPAIN-208ENST00000571043 CSPG5O95196 566 aa17.77■□□□□ 0.44
RPAIN-208ENST00000571043 RTN3O95197 1032 aaPredicted RBP17.77■□□□□ 0.44
RPAIN-208ENST00000571043 HAPLN1P10915 354 aaPredicted RBP17.77■□□□□ 0.44
RPAIN-208ENST00000571043 BRAFP15056 766 aa17.77■□□□□ 0.44
RPAIN-208ENST00000571043 HNRNPH2P55795 449 aaKnown RBP17.77■□□□□ 0.44
RPAIN-208ENST00000571043 NRG1Q02297 640 aaPredicted RBP17.77■□□□□ 0.44
RPAIN-208ENST00000571043 ZNF33AQ06730 810 aa17.77■□□□□ 0.44
RPAIN-208ENST00000571043 ZNF534Q76KX8 674 aa17.77■□□□□ 0.44
RPAIN-208ENST00000571043 TRABD2AQ86V40 505 aa17.77■□□□□ 0.44
RPAIN-208ENST00000571043 IGDCC3Q8IVU1 814 aa17.77■□□□□ 0.44
RPAIN-208ENST00000571043 SPATA17Q96L03 361 aa17.77■□□□□ 0.44
RPAIN-208ENST00000571043 CCT8L2Q96SF2 557 aa17.77■□□□□ 0.44
RPAIN-208ENST00000571043 SLC27A5Q9Y2P5 690 aa17.77■□□□□ 0.44
RPAIN-208ENST00000571043 SNX10Q9Y5X0 201 aa17.77■□□□□ 0.44
RPAIN-208ENST00000571043 ZNF638Q14966 1978 aaKnown RBP17.77■□□□□ 0.43
RPAIN-208ENST00000571043 TMEM120BA0PK00 339 aa17.77■□□□□ 0.43
RPAIN-208ENST00000571043 KCNU1A8MYU2 1149 aa17.77■□□□□ 0.43
RPAIN-208ENST00000571043 RASA4BC9J798 803 aa17.77■□□□□ 0.43
RPAIN-208ENST00000571043 TRDMT1O14717 391 aaKnown RBP17.77■□□□□ 0.43
RPAIN-208ENST00000571043 FGF10O15520 208 aaPredicted RBP17.77■□□□□ 0.43
RPAIN-208ENST00000571043 RASA4O43374 803 aa17.77■□□□□ 0.43
RPAIN-208ENST00000571043 SEC24AO95486 1093 aa17.77■□□□□ 0.43
RPAIN-208ENST00000571043 STX2P32856 288 aa17.77■□□□□ 0.43
RPAIN-208ENST00000571043 TUFMP49411 452 aaKnown RBP17.77■□□□□ 0.43
RPAIN-208ENST00000571043 GPR15P49685 360 aa17.77■□□□□ 0.43
RPAIN-208ENST00000571043 PGFP49763 221 aa17.77■□□□□ 0.43
RPAIN-208ENST00000571043 PSEN1P49768 467 aa17.77■□□□□ 0.43
RPAIN-208ENST00000571043 CLCN4P51793 760 aa17.77■□□□□ 0.43
RPAIN-208ENST00000571043 SEC24CP53992 1094 aa17.77■□□□□ 0.43
RPAIN-208ENST00000571043 COG7P83436 770 aa17.77■□□□□ 0.43
RPAIN-208ENST00000571043 ADGRD1Q6QNK2 874 aa17.77■□□□□ 0.43
RPAIN-208ENST00000571043 DENND5BQ6ZUT9 1274 aa17.77■□□□□ 0.43
RPAIN-208ENST00000571043 TCEAL8Q8IYN2 117 aa17.77■□□□□ 0.43
RPAIN-208ENST00000571043 TTC9BQ8N6N2 239 aa17.77■□□□□ 0.43
RPAIN-208ENST00000571043 NPWQ8N729 165 aa17.77■□□□□ 0.43
RPAIN-208ENST00000571043 CLIC5Q9NZA1 410 aa17.77■□□□□ 0.43
RPAIN-208ENST00000571043 LMCD1Q9NZU5 365 aa17.77■□□□□ 0.43
RPAIN-208ENST00000571043 SFMBT1Q9UHJ3 866 aa17.77■□□□□ 0.43
RPAIN-208ENST00000571043 CLASP2O75122 1294 aaKnown RBP17.76■□□□□ 0.43
RPAIN-208ENST00000571043 AVILO75366 819 aa17.76■□□□□ 0.43
RPAIN-208ENST00000571043 PAGE1O75459 146 aa17.76■□□□□ 0.43
RPAIN-208ENST00000571043 SLC2A3P11169 496 aa17.76■□□□□ 0.43
RPAIN-208ENST00000571043 YWHAQP27348 245 aa17.76■□□□□ 0.43
RPAIN-208ENST00000571043 GARSP41250 739 aaKnown RBP17.76■□□□□ 0.43
RPAIN-208ENST00000571043 SLC18A1P54219 525 aa17.76■□□□□ 0.43
RPAIN-208ENST00000571043 SYCP2LQ5T4T6 812 aa17.76■□□□□ 0.43
RPAIN-208ENST00000571043 MANEALQ5VSG8 457 aa17.76■□□□□ 0.43
RPAIN-208ENST00000571043 SDHAF4Q5VUM1 108 aa17.76■□□□□ 0.43
RPAIN-208ENST00000571043 SRRM1Q8IYB3 904 aaKnown RBP17.76■□□□□ 0.43
RPAIN-208ENST00000571043 ZNF567Q8N184 647 aa17.76■□□□□ 0.43
RPAIN-208ENST00000571043 AGGF1Q8N302 714 aaeCLIP17.76■□□□□ 0.43
RPAIN-208ENST00000571043 LZTR1Q8N653 840 aa17.76■□□□□ 0.43
RPAIN-208ENST00000571043 CEP295NLQ96MC4 621 aa17.76■□□□□ 0.43
RPAIN-208ENST00000571043 VAT1Q99536 393 aa17.76■□□□□ 0.43
RPAIN-208ENST00000571043 CATSPERBQ9H7T0 1116 aa17.76■□□□□ 0.43
RPAIN-208ENST00000571043 CYP4F11Q9HBI6 524 aa17.76■□□□□ 0.43
RPAIN-208ENST00000571043 OSER1Q9NX31 292 aa17.76■□□□□ 0.43
RPAIN-208ENST00000571043 ZC3H7BQ9UGR2 993 aaKnown RBP17.76■□□□□ 0.43
RPAIN-208ENST00000571043 TRHDEQ9UKU6 1024 aa17.76■□□□□ 0.43
RPAIN-208ENST00000571043 NEU3Q9UQ49 428 aa17.76■□□□□ 0.43
RPAIN-208ENST00000571043 TLR6Q9Y2C9 796 aa17.76■□□□□ 0.43
RPAIN-208ENST00000571043 TCRBV9S1A1TA0A576 114 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 GLUD1P00367 558 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 CREB1P16220 341 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 PTPN3P26045 913 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 ELF1P32519 619 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 MSH2P43246 934 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 RPL10AP62906 217 aaKnown RBP17.75■□□□□ 0.43
RPAIN-208ENST00000571043 GRIN2CQ14957 1233 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 MGAT5BQ3V5L5 792 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 LRRC8BQ6P9F7 803 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 ADGRD2Q7Z7M1 963 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 TP53INP2Q8IXH6 220 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 ZNF473Q8WTR7 871 aaKnown RBP17.75■□□□□ 0.43
RPAIN-208ENST00000571043 SLC22A17Q8WUG5 538 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 TBC1D31Q96DN5 1066 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 CHMP6Q96FZ7 201 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 SLC39A13Q96H72 371 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 LRCH3Q96II8 777 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 SIGLEC10Q96LC7 697 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 C1orf74Q96LT6 269 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 PAFAH2Q99487 392 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 EBNA1BP2Q99848 306 aaKnown RBP17.75■□□□□ 0.43
RPAIN-208ENST00000571043 TLE6Q9H808 572 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 KCNK9Q9NPC2 374 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 OLA1Q9NTK5 396 aaKnown RBP17.75■□□□□ 0.43
RPAIN-208ENST00000571043 SEPT10Q9P0V9 454 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 GMIPQ9P107 970 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 PATJQ8NI35 1801 aa17.75■□□□□ 0.43
RPAIN-208ENST00000571043 REV3LO60673 3130 aa17.74■□□□□ 0.43
RPAIN-208ENST00000571043 PER2O15055 1255 aa17.74■□□□□ 0.43
RPAIN-208ENST00000571043 MSI1O43347 362 aaKnown RBP17.74■□□□□ 0.43
RPAIN-208ENST00000571043 CPP00450 1065 aa17.74■□□□□ 0.43
RPAIN-208ENST00000571043 SPATA31D3P0C874 917 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms