RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ISCUQ9H1K1 167 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 MIR1-1HGQ9H1L0 117 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 IKZF4Q9H2S9 585 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 SEMA6BQ9H3T3 888 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 TXNRD2Q9NNW7 524 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 A1CFQ9NQ94 594 aaKnown RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 PXMP2Q9NR77 195 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 SDHAF3Q9NRP4 125 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 FAM114A2Q9NRY5 505 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 SIRT3Q9NTG7 399 aaPredicted RBP3.67□□□□□ -1.82
SMG6-208ENST00000570874 TMEM39AQ9NV64 488 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 NDFIP2Q9NV92 336 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 MOCS1Q9NZB8 636 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 NINJ2Q9NZG7 142 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 EHD3Q9NZN3 535 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 ADAMTS5Q9UNA0 930 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 STK38LQ9Y2H1 464 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 CBY1Q9Y3M2 126 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 PCDHB14Q9Y5E9 798 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 UBIAD1Q9Y5Z9 338 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 FRMPD4Q14CM0 1322 aa3.67□□□□□ -1.82
SMG6-208ENST00000570874 A0A0G2JLL6 359 aaPredicted RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 A0A0U1RQJ8 604 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 TCRBV16S1A1N1A0A5B0 115 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 XKRY2A2RUG3 117 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 EME2A4GXA9 379 aaPredicted RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 GOLGA6L9A6NEM1 432 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 MEIS3P2A8K0S8 358 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 LGALS16A8MUM7 142 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 A8MXE2 369 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 KCNJ18B7U540 433 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 HSBP1L1C9JCN9 74 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 C3orf80F5H4A9 247 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 H3BM21 787 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 H7BY64 318 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 TRIM38O00635 465 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 NDUFAB1O14561 156 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 DHX15O43143 795 aaKnown RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 ZW10O43264 779 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 RNF40O75150 1001 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 CILPO75339 1184 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 GJB3O75712 270 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 CRTAPO75718 401 aaPredicted RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 PRPF6O94906 941 aaKnown RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 CCNE2O96020 404 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 SOD2P04179 222 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 TUBBP07437 444 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 RARBP10826 455 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 MYF5P13349 255 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 TSHRP16473 764 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 ZFXP17010 805 aaPredicted RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 GLRA2P23416 452 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 ADSLP30566 484 aaPredicted RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 BMI1P35226 326 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 ADRA1BP35368 520 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 PPARGP37231 505 aaPredicted RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 VEGFBP49765 207 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 KLK7P49862 253 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 AGFG1P52594 562 aaKnown RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 PPP5CP53041 499 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 COPB1P53618 953 aaKnown RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 PPP2R2AP63151 447 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 MRPS5P82675 430 aaKnown RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 FOXK2Q01167 660 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 CNTN2Q02246 1040 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 GHRHRQ02643 423 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 CREMQ03060 361 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 KCNAB2Q13303 367 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 MAMLD1Q13495 774 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 TUBB2AQ13885 445 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 BYSLQ13895 437 aaKnown RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 TRIM25Q14258 630 aaKnown RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 GNA13Q14344 377 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 KCNJ12Q14500 433 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 NR1I3Q14994 352 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 KRT31Q15323 416 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 SNCBQ16143 134 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 Q3ZCU0 254 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 CEP78Q5JTW2 689 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 TBCELQ5QJ74 424 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 TEX35Q5T0J7 233 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 COL13A1Q5TAT6 717 aaPredicted RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 MAP3K21Q5TCX8 1036 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 SH3PXD2AQ5TCZ1 1133 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 SHEQ5VZ18 495 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 ANKRD40Q6AI12 368 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 TTI2Q6NXR4 508 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 MIS18BP1Q6P0N0 1132 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 USP50Q70EL3 339 aaPredicted RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 UNC13DQ70J99 1090 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 ZNF438Q7Z4V0 828 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 PRRT2Q7Z6L0 340 aaPredicted RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 RABEPKQ7Z6M1 372 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 DDX53Q86TM3 631 aaKnown RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 TTC7BQ86TV6 843 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 MON1AQ86VX9 555 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 SFR1Q86XK3 245 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 LIX1LQ8IVB5 337 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 VSTM4Q8IW00 320 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms