RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	EDDM13	A0A1B0GTR0	161 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	MYO1F	O00160	1098 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	AP5Z1	O43299	807 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	CCP110	O43303	1012 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	H2AFZ	P0C0S5	128 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	C7	P10643	843 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	RHOQ	P17081	205 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	TFE3	P19532	575 aa	Predicted RBP	18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	IL12RB1	P42701	662 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	RPL7A	P62424	266 aa	Known RBP	18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	CCDC15	Q0P6D6	951 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	FUT11	Q495W5	492 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	TTC31	Q49AM3	519 aa	Predicted RBP	18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	BOLA3	Q53S33	107 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	TRNP1	Q6NT89	227 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	SCYL2	Q6P3W7	929 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	H2AFV	Q71UI9	128 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	LPCAT2	Q7L5N7	544 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	SFTPA1	Q8IWL2	248 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	OR2T3	Q8NH03	318 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	IGSF8	Q969P0	613 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	C2orf42	Q9NWW7	574 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	CALCOCO1	Q9P1Z2	691 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	ARHGAP20	Q9P2F6	1191 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	TPX2	Q9ULW0	747 aa	Known RBP	18.49	■□□□□ 0.55
PKD1-238	ENST00000570150	ERVW-1	Q9UQF0	538 aa		18.49	■□□□□ 0.55
PKD1-238	ENST00000570150		A0A087X0T9	212 aa		18.48	■□□□□ 0.55
PKD1-238	ENST00000570150	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	18.48	■□□□□ 0.55
PKD1-238	ENST00000570150	HR	O43593	1189 aa		18.48	■□□□□ 0.55
PKD1-238	ENST00000570150	FAM228B	P0C875	321 aa		18.48	■□□□□ 0.55
PKD1-238	ENST00000570150	SDHB	P21912	280 aa		18.48	■□□□□ 0.55
PKD1-238	ENST00000570150	HOXD12	P35452	270 aa		18.48	■□□□□ 0.55
PKD1-238	ENST00000570150	EIF4A3	P38919	411 aa	Known RBP	18.48	■□□□□ 0.55
PKD1-238	ENST00000570150	P2RY2	P41231	377 aa		18.48	■□□□□ 0.55
PKD1-238	ENST00000570150	HNRNPA1L2	Q32P51	320 aa	Known RBP	18.48	■□□□□ 0.55
PKD1-238	ENST00000570150	TMEM215	Q68D42	235 aa		18.48	■□□□□ 0.55
PKD1-238	ENST00000570150	CXorf57	Q6NSI4	855 aa	Known RBP	18.48	■□□□□ 0.55
PKD1-238	ENST00000570150	RWDD4	Q6NW29	188 aa	Known RBP	18.48	■□□□□ 0.55
PKD1-238	ENST00000570150	PHLDB2	Q86SQ0	1253 aa		18.48	■□□□□ 0.55
PKD1-238	ENST00000570150	ZNF683	Q8IZ20	524 aa		18.48	■□□□□ 0.55
PKD1-238	ENST00000570150	DCAF4L2	Q8NA75	395 aa		18.48	■□□□□ 0.55
PKD1-238	ENST00000570150	SIPA1	Q96FS4	1042 aa		18.48	■□□□□ 0.55
PKD1-238	ENST00000570150	ACOX2	Q99424	681 aa		18.48	■□□□□ 0.55
PKD1-238	ENST00000570150	PCED1A	Q9H1Q7	454 aa		18.48	■□□□□ 0.55
PKD1-238	ENST00000570150	IPO7	O95373	1038 aa	Known RBP	18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	CYP1A2	P05177	515 aa		18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	GABRG2	P18507	467 aa		18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	HADH	Q16836	314 aa	Known RBP	18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	PTPRN	Q16849	979 aa		18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	FSCB	Q5H9T9	825 aa		18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	ERMARD	Q5T6L9	678 aa		18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	TMPRSS6	Q8IU80	811 aa		18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	CCDC170	Q8IYT3	715 aa		18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	NIPA2	Q8N8Q9	360 aa		18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	FOXJ1	Q92949	421 aa		18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	P2RY11	Q96G91	374 aa		18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	CALR3	Q96L12	384 aa	Known RBP	18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	MRGPRX1	Q96LB2	322 aa		18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	MAGEH1	Q9H213	219 aa		18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	TMEM248	Q9NWD8	314 aa		18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	MYO1A	Q9UBC5	1043 aa		18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	HCN2	Q9UL51	889 aa		18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	INTU	Q9ULD6	942 aa		18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	NCKAP1	Q9Y2A7	1128 aa		18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	RIF1	Q5UIP0	2472 aa	Known RBP	18.47	■□□□□ 0.55
PKD1-238	ENST00000570150	ALOX15B	O15296	676 aa		18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	NDUFS2	O75306	463 aa		18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	DNTT	P04053	509 aa		18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	NDUFV2	P19404	249 aa		18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	WAS	P42768	502 aa		18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	PXN	P49023	591 aa	Predicted RBP	18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	YBEY	P58557	167 aa	Predicted RBP	18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	DMWD	Q09019	674 aa		18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	TBX2	Q13207	712 aa	Predicted RBP	18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	ELAVL3	Q14576	367 aa	Known RBP	18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	MANEAL	Q5VSG8	457 aa		18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	ZNF776	Q68DI1	518 aa	Predicted RBP	18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	KBTBD6	Q86V97	674 aa		18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	RHOT2	Q8IXI1	618 aa		18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	TXLNB	Q8N3L3	684 aa		18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	WFDC5	Q8TCV5	224 aa		18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	CYB5D2	Q8WUJ1	264 aa		18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	ADAM33	Q9BZ11	813 aa		18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	ZWILCH	Q9H900	591 aa		18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	FZD10	Q9ULW2	581 aa		18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	HS3ST2	Q9Y278	367 aa		18.46	■□□□□ 0.55
PKD1-238	ENST00000570150	CFAP54	Q96N23	3096 aa		18.45	■□□□□ 0.54
PKD1-238	ENST00000570150	RAMP2	O60895	175 aa		18.45	■□□□□ 0.54
PKD1-238	ENST00000570150	LRIG2	O94898	1065 aa		18.45	■□□□□ 0.54
PKD1-238	ENST00000570150	IGLV3-19	P01714	112 aa		18.45	■□□□□ 0.54
PKD1-238	ENST00000570150	TMEM253	P0C7T8	217 aa		18.45	■□□□□ 0.54
PKD1-238	ENST00000570150	EPHB2	P29323	1055 aa		18.45	■□□□□ 0.54
PKD1-238	ENST00000570150	HCAR3	P49019	387 aa		18.45	■□□□□ 0.54
PKD1-238	ENST00000570150	ATXN1	P54253	815 aa	Known RBP	18.45	■□□□□ 0.54
PKD1-238	ENST00000570150	PLK5	Q496M5	336 aa		18.45	■□□□□ 0.54
PKD1-238	ENST00000570150	SYCP2L	Q5T4T6	812 aa		18.45	■□□□□ 0.54
PKD1-238	ENST00000570150	FAM46C	Q5VWP2	391 aa		18.45	■□□□□ 0.54
PKD1-238	ENST00000570150	KIAA1324	Q6UXG2	1013 aa	Known RBP	18.45	■□□□□ 0.54
PKD1-238	ENST00000570150	USP30	Q70CQ3	517 aa		18.45	■□□□□ 0.54

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms