RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ITGB3P05106 788 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 PLS3P13797 630 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 PLCG1P19174 1290 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 WARSP23381 471 aaKnown RBP6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 ADRA1BP35368 520 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 DRD3P35462 400 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 RECQLP46063 649 aaPredicted RBP6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 ACOT2P49753 483 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 SLC5A3P53794 718 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 CCL7P80098 99 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 HNRNPUQ00839 825 aaKnown RBP eCLIP6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 ADCK5Q3MIX3 580 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 MDH1BQ5I0G3 518 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 TTC22Q5TAA0 569 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 RNF20Q5VTR2 975 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 HAUS3Q68CZ6 603 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 MBLAC2Q68D91 279 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 RINT1Q6NUQ1 792 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 C1orf186Q6ZWK4 172 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 TAOK1Q7L7X3 1001 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 HS2ST1Q7LGA3 356 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 ABI3BPQ7Z7G0 1075 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 FAM217AQ8IXS0 508 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 SDR16C5Q8N3Y7 309 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 FBXL16Q8N461 479 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 C1orf127Q8N9H9 656 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 DDI1Q8WTU0 396 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 BRF1Q92994 677 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 FAM129BQ96TA1 746 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 TIPINQ9BVW5 301 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 DCLK3Q9C098 648 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 ZNF518BQ9C0D4 1074 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 LRRN3Q9H3W5 708 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 TLR8Q9NR97 1041 aaKnown RBP6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 GPR27Q9NS67 375 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 RABGEF1Q9UJ41 708 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 PCDHA5Q9Y5H7 936 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 MXRA5Q9NR99 2828 aa6.88□□□□□ -1.31
HERPUD1-217ENST00000569429 PRICKLE3O43900 615 aaPredicted RBP6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 RAD1O60671 282 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 RFPL1O75677 317 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 RPLP0P05388 317 aaKnown RBP6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 HMGB1P09429 215 aaKnown RBP6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 PDGFRBP09619 1106 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 PABPC1P11940 636 aaKnown RBP6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 BPIP17213 487 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 TCN2P20062 427 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 HOXD9P28356 352 aaPredicted RBP6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 FZD2Q14332 565 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 NADK2Q4G0N4 442 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 C14orf28Q4W4Y0 310 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 PRR30Q53SZ7 412 aaPredicted RBP6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 ESRP1Q6NXG1 681 aaKnown RBP6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 Q6ZUG5 572 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 CDH24Q86UP0 819 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 KDM1BQ8NB78 822 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 GLIS1Q8NBF1 620 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 NOX5Q96PH1 765 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 TAAR9Q96RI9 348 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 KCNK16Q96T55 309 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 LARP6Q9BRS8 491 aaKnown RBP6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 RUSC1Q9BVN2 902 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 MFRPQ9BY79 579 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 AGXT2Q9BYV1 514 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 CPEB1Q9BZB8 566 aaKnown RBP6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 TRIM8Q9BZR9 551 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 TMEM60Q9H2L4 133 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 FBXO44Q9H4M3 255 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 GPN2Q9H9Y4 310 aaPredicted RBP6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 NCOA5Q9HCD5 579 aaKnown RBP6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 GGT7Q9UJ14 662 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 GGA2Q9UJY4 613 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 TLK1Q9UKI8 766 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 KIAA1024Q9UPX6 916 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 CUBNO60494 3623 aa6.87□□□□□ -1.31
HERPUD1-217ENST00000569429 SPTY2D1-AS1A0A0U1RR47 76 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 LMO7DNF2Z398 122 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 CLDN5O00501 218 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 MDM4O15151 490 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 SLC31A1O15431 190 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 IL18RAPO95256 599 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 POLR2EP19388 210 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 SCP2P22307 547 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 HNRNPA2B1P22626 353 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 AKT2P31751 481 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 CLCN1P35523 988 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 PSMD8P48556 350 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 NCKAP1LP55160 1127 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 PER3P56645 1201 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 ST8SIA6P61647 398 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 CCT2P78371 535 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 NR6A1Q15406 480 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 MPPE1Q53F39 396 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 SCARA3Q6AZY7 606 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 SLC39A4Q6P5W5 647 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 CRELD2Q6UXH1 353 aaPredicted RBP6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 GCNT7Q6ZNI0 430 aa6.86□□□□□ -1.31
HERPUD1-217ENST00000569429 Q6ZSR6 202 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms