RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 LCN1P1Q5VSP4 162 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 MB21D2Q8IYB1 491 aaPredicted RBP5.18□□□□□ -1.58
SMG1-211ENST00000565324 LEMD2Q8NC56 503 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 PIK3R3Q92569 461 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 ERMAPQ96PL5 475 aaPredicted RBP5.18□□□□□ -1.58
SMG1-211ENST00000565324 CITED4Q96RK1 184 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 PLEKHF1Q96S99 279 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 NUDT12Q9BQG2 462 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 MTG1Q9BT17 334 aaPredicted RBP5.18□□□□□ -1.58
SMG1-211ENST00000565324 MTMR12Q9C0I1 747 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 SLC39A8Q9C0K1 460 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 WDCPQ9H6R7 721 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 C12orf4Q9NQ89 552 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 ADAMTS12P58397 1594 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 SGTAO43765 313 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 BGNP21810 368 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 DGCR6Q14129 220 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 TMEM132BQ14DG7 1078 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 TAF13Q15543 124 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 ZNHIT3Q15649 155 aaPredicted RBP5.18□□□□□ -1.58
SMG1-211ENST00000565324 EIF5AL1Q6IS14 154 aaKnown RBP5.18□□□□□ -1.58
SMG1-211ENST00000565324 MSANTD1Q6ZTZ1 278 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 MTSS1LQ765P7 747 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 BBS4Q96RK4 519 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 TUBE1Q9UJT0 475 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.18□□□□□ -1.58
SMG1-211ENST00000565324 FAM50BQ9Y247 325 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 NRKQ7Z2Y5 1582 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 MYO18AQ92614 2054 aaKnown RBP5.18□□□□□ -1.58
SMG1-211ENST00000565324 PRODHO43272 600 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 PMPCBO75439 489 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 OR6A2O95222 327 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 METTL18O95568 372 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 TNFRSF8P28908 595 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 AVPR1AP37288 418 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 CDH17Q12864 832 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 CUL2Q13617 745 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 KLHDC7AQ5VTJ3 777 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 TDRD10Q5VZ19 366 aaKnown RBP5.18□□□□□ -1.58
SMG1-211ENST00000565324 DHDDSQ86SQ9 333 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 OAFQ86UD1 273 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 RAB43Q86YS6 212 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 PHACTR4Q8IZ21 702 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 MED11Q9P086 117 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 METP08581 1390 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 MRASO14807 208 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 WFS1O76024 890 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 GH2P01242 217 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 PRKCEQ02156 737 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 C10orf120Q5SQS8 335 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 N4BP2L1Q5TBK1 243 aaPredicted RBP5.18□□□□□ -1.58
SMG1-211ENST00000565324 RNF43Q68DV7 783 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 LRRC20Q8TCA0 184 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 PTCD2Q8WV60 388 aaKnown RBP5.18□□□□□ -1.58
SMG1-211ENST00000565324 MKLN1Q9UL63 735 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 MPZL2O60487 215 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 HLA-DRAP01903 254 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 FAM153BP0C7A2 387 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 NR2F6P10588 404 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 FXR2P51116 673 aaKnown RBP eCLIP5.18□□□□□ -1.582e-7■■■■□ 19.6
SMG1-211ENST00000565324 C11orf96Q7Z7L8 435 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 AIFM3Q96NN9 605 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 USP18Q9UMW8 372 aa5.18□□□□□ -1.58
SMG1-211ENST00000565324 ASTN2O75129 1339 aaPredicted RBP5.18□□□□□ -1.58
SMG1-211ENST00000565324 APOL3O95236 402 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 ANPEPP15144 967 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 ACAP2Q15057 778 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 PDIA6Q15084 440 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 PERM1Q5SV97 790 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 PGBD2Q6P3X8 592 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 ARCQ7LC44 396 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 CD302Q8IX05 232 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 ZKSCAN4Q969J2 545 aaPredicted RBP5.17□□□□□ -1.58
SMG1-211ENST00000565324 TMEM159Q96B96 161 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 ZNF607Q96SK3 696 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 PHF20Q9BVI0 1012 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 LRMDAQ9H2I8 198 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 XKR8Q9H6D3 395 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 TRMT13Q9NUP7 481 aaKnown RBP5.17□□□□□ -1.58
SMG1-211ENST00000565324 TRPC4Q9UBN4 977 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 MORF4L1Q9UBU8 362 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 DSEQ9UL01 958 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 NOL4O94818 638 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 IDH2P48735 452 aaKnown RBP5.17□□□□□ -1.58
SMG1-211ENST00000565324 NPY2RP49146 381 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 PSME3P61289 254 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 USP46P62068 366 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 SUZ12Q15022 739 aaKnown RBP5.17□□□□□ -1.58
SMG1-211ENST00000565324 SMTNL2Q2TAL5 461 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 IER5Q5VY09 327 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 GPAT2Q6NUI2 795 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 CBWD2Q8IUF1 395 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 TNFAIP8L1Q8WVP5 186 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 SP140LQ9H930 580 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 NECTIN3Q9NQS3 549 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 SYNPO2Q9UMS6 1093 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 BCS1LQ9Y276 419 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 SLC9A8Q9Y2E8 581 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 DHRS7Q9Y394 339 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 SH3BP1Q9Y3L3 701 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms