RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 PIGKQ92643 395 aa5.14□□□□□ -1.59
LINC00560-201ENST00000564593 ZUFSPQ96AP4 578 aa5.14□□□□□ -1.59
LINC00560-201ENST00000564593 ADAD1Q96M93 576 aaKnown RBP5.14□□□□□ -1.59
LINC00560-201ENST00000564593 ZNF347Q96SE7 839 aa5.14□□□□□ -1.59
LINC00560-201ENST00000564593 CD180Q99467 661 aa5.14□□□□□ -1.59
LINC00560-201ENST00000564593 PHF7Q9BWX1 381 aaPredicted RBP5.14□□□□□ -1.59
LINC00560-201ENST00000564593 GATA5Q9BWX5 397 aaPredicted RBP5.14□□□□□ -1.59
LINC00560-201ENST00000564593 AGXT2Q9BYV1 514 aa5.14□□□□□ -1.59
LINC00560-201ENST00000564593 MROH8Q9H579 483 aa5.14□□□□□ -1.59
LINC00560-201ENST00000564593 ALKBH4Q9NXW9 302 aa5.14□□□□□ -1.59
LINC00560-201ENST00000564593 PKP3Q9Y446 797 aa5.14□□□□□ -1.59
LINC00560-201ENST00000564593 CYP46A1Q9Y6A2 500 aa5.14□□□□□ -1.59
LINC00560-201ENST00000564593 COL11A2P13942 1736 aaPredicted RBP5.13□□□□□ -1.59
LINC00560-201ENST00000564593 TULP3O75386 442 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 C1QL1O75973 258 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 RNF8O76064 485 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 SGPL1O95470 568 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 IGLV2-14P01704 120 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 TUBA4AP68366 448 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 RPP30P78346 268 aaKnown RBP5.13□□□□□ -1.59
LINC00560-201ENST00000564593 MTA1Q13330 715 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 TDGQ13569 410 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 BYSLQ13895 437 aaKnown RBP5.13□□□□□ -1.59
LINC00560-201ENST00000564593 BAK1Q16611 211 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 NAA35Q5VZE5 725 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 ACAD10Q6JQN1 1059 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 SLC30A9Q6PML9 568 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 ZNF474Q6S9Z5 364 aaPredicted RBP5.13□□□□□ -1.59
LINC00560-201ENST00000564593 RBM44Q6ZP01 1051 aaKnown RBP5.13□□□□□ -1.59
LINC00560-201ENST00000564593 RNF144BQ7Z419 303 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 MDGA2Q7Z553 956 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 BRSK2Q8IWQ3 736 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 LSM14AQ8ND56 463 aaKnown RBP5.13□□□□□ -1.59
LINC00560-201ENST00000564593 C2CD4CQ8TF44 421 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 HDAC2Q92769 488 aaKnown RBP5.13□□□□□ -1.59
LINC00560-201ENST00000564593 SH3KBP1Q96B97 665 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 ZBTB10Q96DT7 871 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 APOPT1Q96IL0 206 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 FCRL5Q96RD9 977 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 EFHD1Q9BUP0 239 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 IKZF4Q9H2S9 585 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 ERVK-5Q9HDB9 667 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 ARL15Q9NXU5 204 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 ZNHIT2Q9UHR6 403 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 DTX4Q9Y2E6 619 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 AOX1Q06278 1338 aa5.13□□□□□ -1.59
LINC00560-201ENST00000564593 HMGB1P1B2RPK0 211 aaPredicted RBP5.12□□□□□ -1.59
LINC00560-201ENST00000564593 ST6GAL1P15907 406 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 SOX2P48431 317 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 CASP6P55212 293 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 TGFB2P61812 414 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 COL10A1Q03692 680 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 NAA25Q14CX7 972 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 SEC23BQ15437 767 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 ARL13AQ5H913 290 aaPredicted RBP5.12□□□□□ -1.59
LINC00560-201ENST00000564593 SH2D4BQ5SQS7 431 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 FAM180BQ6P0A1 224 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 GALNT7Q86SF2 657 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 ADGRG6Q86SQ4 1221 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 BOLLQ8N9W6 283 aaKnown RBP5.12□□□□□ -1.59
LINC00560-201ENST00000564593 FAM110DQ8TAY7 271 aaPredicted RBP5.12□□□□□ -1.59
LINC00560-201ENST00000564593 NCSTNQ92542 709 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 KAT2BQ92831 832 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 AGAP2Q99490 1192 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 FUZQ9BT04 418 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 TM2D2Q9BX73 214 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 TXNRD2Q9NNW7 524 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 LRRC3CA6NJW4 275 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 FAM90A7PA6NKC0 464 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 FAM90A22PA8MWA6 464 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 FAM90A12PA8MX19 464 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 FAM90A23PA8MXZ1 464 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 B4E171 279 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 PROP1O75360 226 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 ABCD3P28288 659 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 HNF1BP35680 557 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 GGT5P36269 586 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 TSPAN7P41732 249 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 PAFAH1B1P43034 410 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 TFF2Q03403 129 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 CAMK1Q14012 370 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 AP5B1Q2VPB7 878 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 STRIP1Q5VSL9 837 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 SLC22A25Q6T423 547 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 RTL10Q7L3V2 364 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 FAM47BQ8NA70 645 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 OR52N4Q8NGI2 321 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 ZNF398Q8TD17 642 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 TBC1D22AQ8WUA7 517 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 RUFY2Q8WXA3 655 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 CHFRQ96EP1 664 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 FBXO4Q9UKT5 387 aa5.12□□□□□ -1.59
LINC00560-201ENST00000564593 INPPL1O15357 1258 aa5.11□□□□□ -1.59
LINC00560-201ENST00000564593 USP12O75317 370 aa5.11□□□□□ -1.59
LINC00560-201ENST00000564593 TBX18O95935 607 aa5.11□□□□□ -1.59
LINC00560-201ENST00000564593 PLAUP00749 431 aa5.11□□□□□ -1.59
LINC00560-201ENST00000564593 TYK2P29597 1187 aa5.11□□□□□ -1.59
LINC00560-201ENST00000564593 GPD2P43304 727 aa5.11□□□□□ -1.59
LINC00560-201ENST00000564593 ELLP55199 621 aaPredicted RBP5.11□□□□□ -1.59
LINC00560-201ENST00000564593 YPEL5P62699 121 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms