RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 ARTNQ5T4W7 220 aa13.07□□□□□ -0.32
HERC2-206ENST00000564519 SLC23A3Q6PIS1 610 aa13.07□□□□□ -0.32
HERC2-206ENST00000564519 RABEPKQ7Z6M1 372 aa13.07□□□□□ -0.32
HERC2-206ENST00000564519 RGL4Q8IZJ4 473 aa13.07□□□□□ -0.32
HERC2-206ENST00000564519 JOSD2Q8TAC2 188 aa13.07□□□□□ -0.32
HERC2-206ENST00000564519 CEP76Q8TAP6 659 aa13.07□□□□□ -0.32
HERC2-206ENST00000564519 ALG14Q96F25 216 aa13.07□□□□□ -0.32
HERC2-206ENST00000564519 RPL10LQ96L21 214 aaKnown RBP13.07□□□□□ -0.32
HERC2-206ENST00000564519 SCNM1Q9BWG6 230 aa13.07□□□□□ -0.32
HERC2-206ENST00000564519 GTPBP2Q9BX10 602 aaKnown RBP13.07□□□□□ -0.32
HERC2-206ENST00000564519 NAT10Q9H0A0 1025 aaKnown RBP13.07□□□□□ -0.32
HERC2-206ENST00000564519 RRN3Q9NYV6 651 aa13.07□□□□□ -0.32
HERC2-206ENST00000564519 SUN2Q9UH99 717 aa13.07□□□□□ -0.32
HERC2-206ENST00000564519 LAMA1P25391 3075 aa13.06□□□□□ -0.32
HERC2-206ENST00000564519 MOCS3O95396 460 aa13.06□□□□□ -0.32
HERC2-206ENST00000564519 SRPRAP08240 638 aaKnown RBP13.06□□□□□ -0.32
HERC2-206ENST00000564519 VAV1P15498 845 aa13.06□□□□□ -0.32
HERC2-206ENST00000564519 ACSL1P33121 698 aa13.06□□□□□ -0.32
HERC2-206ENST00000564519 ATP11AP98196 1134 aa13.06□□□□□ -0.32
HERC2-206ENST00000564519 GFPT1Q06210 699 aaPredicted RBP13.06□□□□□ -0.32
HERC2-206ENST00000564519 DUOXA1Q1HG43 343 aa13.06□□□□□ -0.32
HERC2-206ENST00000564519 CLEC16AQ2KHT3 1053 aa13.06□□□□□ -0.32
HERC2-206ENST00000564519 C15orf59Q2T9L4 293 aaPredicted RBP13.06□□□□□ -0.32
HERC2-206ENST00000564519 BRMS1LQ5PSV4 323 aa13.06□□□□□ -0.32
HERC2-206ENST00000564519 C9orf64Q5T6V5 341 aa13.06□□□□□ -0.32
HERC2-206ENST00000564519 TTC39BQ5VTQ0 682 aaPredicted RBP13.06□□□□□ -0.32
HERC2-206ENST00000564519 DCAF12L1Q5VU92 463 aa13.06□□□□□ -0.32
HERC2-206ENST00000564519 TRIM72Q6ZMU5 477 aa13.06□□□□□ -0.32
HERC2-206ENST00000564519 FAM131BQ86XD5 332 aa13.06□□□□□ -0.32
HERC2-206ENST00000564519 KDF1Q8NAX2 398 aaPredicted RBP13.06□□□□□ -0.32
HERC2-206ENST00000564519 MSANTD4Q8NCY6 345 aa13.06□□□□□ -0.32
HERC2-206ENST00000564519 NAP1L5Q96NT1 182 aaPredicted RBP13.06□□□□□ -0.32
HERC2-206ENST00000564519 NUP58Q9BVL2 599 aa13.06□□□□□ -0.32
HERC2-206ENST00000564519 RSPH9Q9H1X1 276 aaPredicted RBP13.06□□□□□ -0.32
HERC2-206ENST00000564519 C6orf106Q9H6K1 298 aaPredicted RBP13.06□□□□□ -0.32
HERC2-206ENST00000564519 CAPN10Q9HC96 672 aa13.06□□□□□ -0.32
HERC2-206ENST00000564519 RTN4Q9NQC3 1192 aaKnown RBP13.06□□□□□ -0.32
HERC2-206ENST00000564519 SLC6A14Q9UN76 642 aa13.06□□□□□ -0.32
HERC2-206ENST00000564519 OR51B4Q9Y5P0 310 aa13.06□□□□□ -0.32
HERC2-206ENST00000564519 SLCO1B1Q9Y6L6 691 aa13.06□□□□□ -0.32
HERC2-206ENST00000564519 SPAG17Q6Q759 2223 aa13.06□□□□□ -0.32
HERC2-206ENST00000564519 THADAQ6YHU6 1953 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.05□□□□□ -0.32
HERC2-206ENST00000564519 SYCE3A1L190 88 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 DRGXA6NNA5 263 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 OPHN1O60890 802 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 F9P00740 461 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 HOXD12P35452 270 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 ZNF165P49910 485 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 PLK1P53350 603 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 CDH4P55283 916 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 MTA1Q13330 715 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 ZNF177Q13360 481 aaPredicted RBP13.05□□□□□ -0.32
HERC2-206ENST00000564519 ARID5BQ14865 1188 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 IQCB1Q15051 598 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 CCDC14Q49A88 953 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 ZNF776Q68DI1 518 aaPredicted RBP13.05□□□□□ -0.32
HERC2-206ENST00000564519 SND1Q7KZF4 910 aaKnown RBP eCLIP13.05□□□□□ -0.32
HERC2-206ENST00000564519 ARCQ7LC44 396 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 MMAAQ8IVH4 418 aaKnown RBP13.05□□□□□ -0.32
HERC2-206ENST00000564519 KDM1BQ8NB78 822 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 CADM4Q8NFZ8 388 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 OR2I1PQ8NGU4 316 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 RXFP2Q8WXD0 754 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 DNASE2BQ8WZ79 361 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 BAP1Q92560 729 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 PTPRN2Q92932 1015 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 FOXJ1Q92949 421 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 FAM129BQ96TA1 746 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 AGPAT1Q99943 283 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 FEM1AQ9BSK4 669 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 FBRSQ9HAH7 460 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 SEPT11Q9NVA2 429 aaKnown RBP13.05□□□□□ -0.32
HERC2-206ENST00000564519 MPP6Q9NZW5 540 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 SERGEFQ9UGK8 458 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 TBC1D30Q9Y2I9 924 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 ITIH6Q6UXX5 1313 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 PLXND1Q9Y4D7 1925 aa13.05□□□□□ -0.32
HERC2-206ENST00000564519 TNRC6BQ9UPQ9 1833 aaKnown RBP13.04□□□□□ -0.32
HERC2-206ENST00000564519 CHD8Q9HCK8 2581 aa13.04□□□□□ -0.32
HERC2-206ENST00000564519 TARSL2A2RTX5 802 aaKnown RBP13.04□□□□□ -0.32
HERC2-206ENST00000564519 C2CD4BA6NLJ0 364 aa13.04□□□□□ -0.32
HERC2-206ENST00000564519 SMTNL1A8MU46 457 aa13.04□□□□□ -0.32
HERC2-206ENST00000564519 METTL12A8MUP2 240 aa13.04□□□□□ -0.32
HERC2-206ENST00000564519 MEI4A8MW99 385 aa13.04□□□□□ -0.32
HERC2-206ENST00000564519 E9PAM4 449 aa13.04□□□□□ -0.32
HERC2-206ENST00000564519 MID1O15344 667 aa13.04□□□□□ -0.32
HERC2-206ENST00000564519 CLDN11O75508 207 aa13.04□□□□□ -0.32
HERC2-206ENST00000564519 ENDOD1O94919 500 aa13.04□□□□□ -0.32
HERC2-206ENST00000564519 TRIM16O95361 564 aa13.04□□□□□ -0.32
HERC2-206ENST00000564519 DNTTP04053 509 aa13.04□□□□□ -0.32
HERC2-206ENST00000564519 SYPP08247 313 aa13.04□□□□□ -0.32
HERC2-206ENST00000564519 SERPINF2P08697 491 aa13.04□□□□□ -0.32
HERC2-206ENST00000564519 NSFP46459 744 aaKnown RBP13.04□□□□□ -0.32
HERC2-206ENST00000564519 SIM1P81133 766 aaPredicted RBP13.04□□□□□ -0.32
HERC2-206ENST00000564519 ZBTB16Q05516 673 aa13.04□□□□□ -0.32
HERC2-206ENST00000564519 SLC12A1Q13621 1099 aa13.04□□□□□ -0.32
HERC2-206ENST00000564519 CDO1Q16878 200 aa13.04□□□□□ -0.32
HERC2-206ENST00000564519 WDR45BQ5MNZ6 344 aa13.04□□□□□ -0.32
HERC2-206ENST00000564519 SYCP2LQ5T4T6 812 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms