RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 CADM4Q8NFZ8 388 aa26.04■■□□□ 1.76
AC009041.3-201ENST00000564390 SNX19Q92543 992 aa26.04■■□□□ 1.76
AC009041.3-201ENST00000564390 PCDHB18PQ96TA0 734 aa26.04■■□□□ 1.76
AC009041.3-201ENST00000564390 NAT10Q9H0A0 1025 aaKnown RBP26.04■■□□□ 1.76
AC009041.3-201ENST00000564390 C6orf106Q9H6K1 298 aaPredicted RBP26.04■■□□□ 1.76
AC009041.3-201ENST00000564390 ITIH6Q6UXX5 1313 aa26.04■■□□□ 1.76
AC009041.3-201ENST00000564390 PI4KAP42356 2102 aa26.03■■□□□ 1.76
AC009041.3-201ENST00000564390 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.03■■□□□ 1.76
AC009041.3-201ENST00000564390 LRRC10BA6NIK2 292 aa26.03■■□□□ 1.76
AC009041.3-201ENST00000564390 GIPC1O14908 333 aa26.03■■□□□ 1.76
AC009041.3-201ENST00000564390 KCNK5O95279 499 aa26.03■■□□□ 1.76
AC009041.3-201ENST00000564390 VAV1P15498 845 aa26.03■■□□□ 1.76
AC009041.3-201ENST00000564390 MMP8P22894 467 aa26.03■■□□□ 1.76
AC009041.3-201ENST00000564390 NOVA1P51513 510 aaKnown RBP26.03■■□□□ 1.76
AC009041.3-201ENST00000564390 ATXN3P54252 364 aaPredicted RBP26.03■■□□□ 1.76
AC009041.3-201ENST00000564390 ZBTB16Q05516 673 aa26.03■■□□□ 1.76
AC009041.3-201ENST00000564390 ZNF177Q13360 481 aaPredicted RBP26.03■■□□□ 1.76
AC009041.3-201ENST00000564390 RAB6CQ53S08 254 aa26.03■■□□□ 1.76
AC009041.3-201ENST00000564390 ALFQ53S48 1182 aa26.03■■□□□ 1.76
AC009041.3-201ENST00000564390 KDM1BQ8NB78 822 aa26.03■■□□□ 1.76
AC009041.3-201ENST00000564390 RAB6CQ9H0N0 254 aa26.03■■□□□ 1.76
AC009041.3-201ENST00000564390 SUSD2Q9UGT4 822 aa26.03■■□□□ 1.76
AC009041.3-201ENST00000564390 EDDM13A0A1B0GTR0 161 aa26.02■■□□□ 1.76
AC009041.3-201ENST00000564390 METTL12A8MUP2 240 aa26.02■■□□□ 1.76
AC009041.3-201ENST00000564390 F9P00740 461 aa26.02■■□□□ 1.76
AC009041.3-201ENST00000564390 C7P10643 843 aa26.02■■□□□ 1.76
AC009041.3-201ENST00000564390 GNSP15586 552 aa26.02■■□□□ 1.76
AC009041.3-201ENST00000564390 RDXP35241 583 aaKnown RBP26.02■■□□□ 1.76
AC009041.3-201ENST00000564390 ATP11AP98196 1134 aa26.02■■□□□ 1.76
AC009041.3-201ENST00000564390 ARID5BQ14865 1188 aa26.02■■□□□ 1.76
AC009041.3-201ENST00000564390 TRIM72Q6ZMU5 477 aa26.02■■□□□ 1.76
AC009041.3-201ENST00000564390 FAM131BQ86XD5 332 aa26.02■■□□□ 1.76
AC009041.3-201ENST00000564390 MMAAQ8IVH4 418 aaKnown RBP26.02■■□□□ 1.76
AC009041.3-201ENST00000564390 ZNF683Q8IZ20 524 aa26.02■■□□□ 1.76
AC009041.3-201ENST00000564390 GANCQ8TET4 914 aa26.02■■□□□ 1.76
AC009041.3-201ENST00000564390 DNASE2BQ8WZ79 361 aa26.02■■□□□ 1.76
AC009041.3-201ENST00000564390 ALG14Q96F25 216 aa26.02■■□□□ 1.76
AC009041.3-201ENST00000564390 PABPC3Q9H361 631 aaKnown RBP26.02■■□□□ 1.76
AC009041.3-201ENST00000564390 SEPT11Q9NVA2 429 aaKnown RBP26.02■■□□□ 1.76
AC009041.3-201ENST00000564390 SERGEFQ9UGK8 458 aa26.02■■□□□ 1.76
AC009041.3-201ENST00000564390 EIF2B4Q9UI10 523 aaKnown RBP26.02■■□□□ 1.76
AC009041.3-201ENST00000564390 NUMA1Q14980 2115 aa26.02■■□□□ 1.76
AC009041.3-201ENST00000564390 ARHGAP33O14559 1287 aa26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 MID1O15344 667 aa26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 TEX33O43247 280 aa26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 CLDN11O75508 207 aa26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 SEMA4FO95754 770 aa26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 PSMD8P48556 350 aa26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 PLK1P53350 603 aa26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 CST6Q15828 149 aa26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 CDO1Q16878 200 aa26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 C5orf22Q49AR2 442 aa26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 N4BP2L1Q5TBK1 243 aaPredicted RBP26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 SH3PXD2AQ5TCZ1 1133 aa26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 BNIPLQ7Z465 357 aa26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 STK40Q8N2I9 435 aa26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 MINDY1Q8N5J2 469 aa26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 JOSD2Q8TAC2 188 aa26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 FEM1AQ9BSK4 669 aa26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 BTBD1Q9H0C5 482 aa26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 VPS28Q9UK41 221 aa26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 PAXBP1Q9Y5B6 917 aa26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 SLCO1B1Q9Y6L6 691 aa26.01■■□□□ 1.75
AC009041.3-201ENST00000564390 RNASEH1O60930 286 aaKnown RBP26■■□□□ 1.75
AC009041.3-201ENST00000564390 UNGP13051 313 aaPredicted RBP26■■□□□ 1.75
AC009041.3-201ENST00000564390 NSFP46459 744 aaKnown RBP26■■□□□ 1.75
AC009041.3-201ENST00000564390 CDH4P55283 916 aa26■■□□□ 1.75
AC009041.3-201ENST00000564390 OXCT1P55809 520 aa26■■□□□ 1.75
AC009041.3-201ENST00000564390 PTP4A2Q12974 167 aa26■■□□□ 1.75
AC009041.3-201ENST00000564390 CLEC16AQ2KHT3 1053 aa26■■□□□ 1.75
AC009041.3-201ENST00000564390 C15orf59Q2T9L4 293 aaPredicted RBP26■■□□□ 1.75
AC009041.3-201ENST00000564390 TFAP2DQ7Z6R9 452 aa26■■□□□ 1.75
AC009041.3-201ENST00000564390 PTPRN2Q92932 1015 aa26■■□□□ 1.75
AC009041.3-201ENST00000564390 BPIFA3Q9BQP9 254 aa26■■□□□ 1.75
AC009041.3-201ENST00000564390 MUC3BQ9H195 1237 aa26■■□□□ 1.75
AC009041.3-201ENST00000564390 MPP6Q9NZW5 540 aa26■■□□□ 1.75
AC009041.3-201ENST00000564390 OR51B4Q9Y5P0 310 aa26■■□□□ 1.75
AC009041.3-201ENST00000564390 A0A1B0GTW7 788 aa25.99■■□□□ 1.75
AC009041.3-201ENST00000564390 A0A1W2PP55 124 aa25.99■■□□□ 1.75
AC009041.3-201ENST00000564390 TARSL2A2RTX5 802 aaKnown RBP25.99■■□□□ 1.75
AC009041.3-201ENST00000564390 RHOCP08134 193 aa25.99■■□□□ 1.75
AC009041.3-201ENST00000564390 NNMTP40261 264 aa25.99■■□□□ 1.75
AC009041.3-201ENST00000564390 SULT2A1Q06520 285 aa25.99■■□□□ 1.75
AC009041.3-201ENST00000564390 GRIK2Q13002 908 aa25.99■■□□□ 1.75
AC009041.3-201ENST00000564390 DEFB124Q8NES8 71 aa25.99■■□□□ 1.75
AC009041.3-201ENST00000564390 RXFP2Q8WXD0 754 aa25.99■■□□□ 1.75
AC009041.3-201ENST00000564390 FAM129BQ96TA1 746 aa25.99■■□□□ 1.75
AC009041.3-201ENST00000564390 FBXL12Q9NXK8 326 aa25.99■■□□□ 1.75
AC009041.3-201ENST00000564390 SLC25A13Q9UJS0 675 aa25.99■■□□□ 1.75
AC009041.3-201ENST00000564390 TBC1D30Q9Y2I9 924 aa25.99■■□□□ 1.75
AC009041.3-201ENST00000564390 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.99■■□□□ 1.75
AC009041.3-201ENST00000564390 E9PAM4 449 aa25.98■■□□□ 1.75
AC009041.3-201ENST00000564390 FSBPO95073 299 aa25.98■■□□□ 1.75
AC009041.3-201ENST00000564390 SYPP08247 313 aa25.98■■□□□ 1.75
AC009041.3-201ENST00000564390 LRRC31Q6UY01 552 aa25.98■■□□□ 1.75
AC009041.3-201ENST00000564390 ARCQ7LC44 396 aa25.98■■□□□ 1.75
AC009041.3-201ENST00000564390 FRS2Q8WU20 508 aa25.98■■□□□ 1.75
AC009041.3-201ENST00000564390 PCED1AQ9H1Q7 454 aa25.98■■□□□ 1.75
AC009041.3-201ENST00000564390 ADAM22Q9P0K1 906 aa25.98■■□□□ 1.75
AC009041.3-201ENST00000564390 NCKAP1Q9Y2A7 1128 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms