RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 IRF2BPLQ9H1B7 796 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 OSBPL2Q9H1P3 480 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 NHEJ1Q9H9Q4 299 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-204ENST00000563130 CD248Q9HCU0 757 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 MRPL47Q9HD33 250 aaKnown RBP6.38□□□□□ -1.39
CNOT1-204ENST00000563130 ZNHIT6Q9NWK9 470 aaKnown RBP6.38□□□□□ -1.39
CNOT1-204ENST00000563130 ELOVL2Q9NXB9 296 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 ZNF212Q9UDV6 495 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 INTS6Q9UL03 887 aaKnown RBP6.38□□□□□ -1.39
CNOT1-204ENST00000563130 VANGL2Q9ULK5 521 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 TBC1D30Q9Y2I9 924 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 SCINQ9Y6U3 715 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 CCDC163A0A0D9SF12 145 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 TYW5A2RUC4 315 aaKnown RBP6.38□□□□□ -1.39
CNOT1-204ENST00000563130 SGK1O00141 431 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 TIMM44O43615 452 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 PABPC1P11940 636 aaKnown RBP6.38□□□□□ -1.39
CNOT1-204ENST00000563130 CDC25BP30305 580 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 AIF1P55008 147 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 SEC13P55735 322 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 LMAN2Q12907 356 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 DMC1Q14565 340 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 ARL13BQ3SXY8 428 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 ALFQ53S48 1182 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 RABGAP1LQ5R372 815 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 EGFLAMQ63HQ2 1017 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 CXorf57Q6NSI4 855 aaKnown RBP6.38□□□□□ -1.39
CNOT1-204ENST00000563130 TSSK4Q6SA08 328 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 CYP4V2Q6ZWL3 525 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-204ENST00000563130 CHST9Q7L1S5 443 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 AHI1Q8N157 1196 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 CCAR2Q8N163 923 aaKnown RBP6.38□□□□□ -1.39
CNOT1-204ENST00000563130 CAMKK1Q8N5S9 505 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 ALLCQ8N6M5 410 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 CCDC185Q8N715 623 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 TXNDC5Q8NBS9 432 aaKnown RBP6.38□□□□□ -1.39
CNOT1-204ENST00000563130 WFIKKN2Q8TEU8 576 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 TTC17Q96AE7 1141 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 ARHGEF26Q96DR7 871 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 ALG14Q96F25 216 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 CCDC42Q96M95 316 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 RPRD1AQ96P16 312 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-204ENST00000563130 ACOX2Q99424 681 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 GABRG3Q99928 467 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 SIK2Q9H0K1 926 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 ABCB8Q9NUT2 735 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 POLR3BQ9NW08 1133 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-204ENST00000563130 THAP10Q9P2Z0 257 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-204ENST00000563130 PPARGC1AQ9UBK2 798 aaKnown RBP6.38□□□□□ -1.39
CNOT1-204ENST00000563130 GGA2Q9UJY4 613 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 NEU3Q9UQ49 428 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 MAP4K5Q9Y4K4 846 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 ATG2BQ96BY7 2078 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 A0A1W2PQF6 199 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 E9PAM4 449 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 FAM72CH0Y354 149 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 NPC1O15118 1278 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 AKR1B10O60218 316 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 LILRB5O75023 590 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 CLDN11O75508 207 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 CNTN5O94779 1100 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 LCA5LO95447 670 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 AVPP01185 164 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 NTSR1P30989 418 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 PLK1P53350 603 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 CDH4P55283 916 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 CSTF1Q05048 431 aaKnown RBP6.37□□□□□ -1.39
CNOT1-204ENST00000563130 SEMA3BQ13214 749 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 SLC12A1Q13621 1099 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 CDH18Q13634 790 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 ACAP1Q15027 740 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 FUT11Q495W5 492 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 FAM72AQ5TYM5 149 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 FAM72DQ6L9T8 149 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 TRMT11Q7Z4G4 463 aaKnown RBP6.37□□□□□ -1.39
CNOT1-204ENST00000563130 RASSF3Q86WH2 238 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 FAM72BQ86X60 149 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 CIR1Q86X95 450 aaPredicted RBP6.37□□□□□ -1.39
CNOT1-204ENST00000563130 NIPA2Q8N8Q9 360 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 OR52K2Q8NGK3 314 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 PANX2Q96RD6 677 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 OCSTAMPQ9BR26 566 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 PACSIN1Q9BY11 444 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 MAGEB5Q9BZ81 275 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 RETREG1Q9H6L5 497 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 ZDHHC4Q9NPG8 344 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 STIM2Q9P246 746 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 MYO1AQ9UBC5 1043 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 OR12D3Q9UGF7 316 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 EBF1Q9UH73 591 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 OR51B4Q9Y5P0 310 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 SNX10Q9Y5X0 201 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 MYO18AQ92614 2054 aaKnown RBP6.37□□□□□ -1.39
CNOT1-204ENST00000563130 WASH3PC4AMC7 463 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 H0Y626 953 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 LRCH4O75427 683 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 LRIG2O94898 1065 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 KLF8O95600 359 aaPredicted RBP6.37□□□□□ -1.39
CNOT1-204ENST00000563130 H2AFZP0C0S5 128 aa6.37□□□□□ -1.39
CNOT1-204ENST00000563130 TMEM253P0C7T8 217 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms