RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 PDPK2PQ6A1A2 396 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 ZFP1Q6P2D0 407 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 IGDCC3Q8IVU1 814 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 CTAGE3PQ8IX95 158 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 SLC15A4Q8N697 577 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 PIWIL2Q8TC59 973 aaKnown RBP14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 EFHD2Q96C19 240 aaPredicted RBP14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 CCDC138Q96M89 665 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 RPF2Q9H7B2 306 aaKnown RBP14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 ZFYVE28Q9HCC9 887 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 THAP1Q9NVV9 213 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 TCRBV7S3A2A0A539 114 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 H3BMQ9 156 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 WEE2P0C1S8 567 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 JAK1P23458 1154 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 MOGQ16653 247 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 CELF3Q5SZQ8 465 aaKnown RBP14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 THNSL1Q8IYQ7 743 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 PDIK1LQ8N165 341 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 COG8Q96MW5 612 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 RNPEPQ9H4A4 650 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 DKK3Q9UBP4 350 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 KCNH4Q9UQ05 1017 aa14.34□□□□□ -0.11
GTF3C1-203ENST00000562609 H0YCG3 227 aa14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 ZNF701M0R085 212 aaPredicted RBP14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 DCXO43602 365 aa14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 FAM189A1O60320 539 aa14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 TGFB3P10600 412 aa14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 COX4I1P13073 169 aa14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 ZNF26P17031 533 aaPredicted RBP14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 XRCC1P18887 633 aaPredicted RBP14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 GABRB3P28472 473 aa14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 OTUD4Q01804 1114 aaKnown RBP14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 PPIL2Q13356 520 aa14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 FAM209AQ5JX71 171 aa14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 DRICH1Q6PGQ1 229 aaPredicted RBP14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 TRIM72Q6ZMU5 477 aa14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 LYSMD3Q7Z3D4 306 aa14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 PCGF5Q86SE9 256 aa14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 PTCD2Q8WV60 388 aaKnown RBP14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 CTRCQ99895 268 aa14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 KLHL25Q9H0H3 589 aa14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 CLK4Q9HAZ1 481 aaKnown RBP14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 PNPLA3Q9NST1 481 aa14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.33□□□□□ -0.11
GTF3C1-203ENST00000562609 TMEM114B3SHH9 223 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 INO80B-WBP1J3KQ70 363 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 MSCO60682 206 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 BPGMP07738 259 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 ELK3P41970 407 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 GNA12Q03113 381 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 AARS2Q5JTZ9 985 aaKnown RBP14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 TTC39BQ5VTQ0 682 aaPredicted RBP14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 GPR107Q5VW38 600 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 MFSD7Q6UXD7 560 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 CARM1Q86X55 608 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 PEX5LQ8IYB4 626 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 FIBCD1Q8N539 461 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 BHLHE22Q8NFJ8 381 aaPredicted RBP14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 MTMR12Q9C0I1 747 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 PALMDQ9NP74 551 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 POU2F3Q9UKI9 436 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 DRG1Q9Y295 367 aaKnown RBP14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 STYXL1Q9Y6J8 313 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 A0A1W2PQ67 120 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 ANKRD34BA5PLL1 514 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 A8MU76 341 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 SLC25A27O95847 323 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 S100BP04271 92 aaPredicted RBP14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 C8BP07358 591 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 P4HA1P13674 534 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 THOP1P52888 689 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 EIF3EP60228 445 aaKnown RBP14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 GCNT1Q02742 428 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 NDUFA5Q16718 116 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 TMEM132AQ24JP5 1023 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 MGAT5BQ3V5L5 792 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 VWA5B1Q5TIE3 1220 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 IL23RQ5VWK5 629 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 MYO1HQ8N1T3 1032 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 RNF148Q8N7C7 305 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 PPM1NQ8N819 430 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 NAT8LQ8N9F0 302 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 TANKQ92844 425 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 SLC10A4Q96EP9 437 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 UNKQ9C0B0 810 aaKnown RBP14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 MINDY3Q9H8M7 445 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 CXorf21Q9HAI6 301 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 AVENQ9NQS1 362 aaPredicted RBP14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 CARD8Q9Y2G2 431 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 PCDHB4Q9Y5E5 795 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 SNX9Q9Y5X1 595 aa14.33□□□□□ -0.12
GTF3C1-203ENST00000562609 CNTNAP2Q9UHC6 1331 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 KBTBD13C9JR72 458 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 E7ESA3 106 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 AIM2O14862 343 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 KLHL41O60662 606 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 TMEM63AO94886 807 aa14.32□□□□□ -0.12
GTF3C1-203ENST00000562609 CCT8P50990 548 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms