RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 RBL1P28749 1068 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 NOS3P29474 1203 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 OR1E1P30953 314 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 HUNKP57058 714 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 ARMC3Q5W041 872 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 BRSK2Q8IWQ3 736 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 SCUBE3Q8IX30 993 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 TMEM159Q96B96 161 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 SMARCD1Q96GM5 515 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 GRIP2Q9C0E4 1043 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 KLHL31Q9H511 634 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 BTN3A1O00481 513 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 TPP1O14773 563 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 TFRCP02786 760 aaKnown RBP12.87□□□□□ -0.35
SYNM-203ENST00000560674 HMGCRP04035 888 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 FGD3Q5JSP0 725 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 ATAD3BQ5T9A4 648 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 OVOS1Q6IE37 1185 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 GLT6D1Q7Z4J2 308 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 NET1Q7Z628 596 aaPredicted RBP12.87□□□□□ -0.35
SYNM-203ENST00000560674 DEFB106AQ8N104 65 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 FLCNQ8NFG4 579 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 SERPINB11Q96P15 392 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 OSGEPL1Q9H4B0 414 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 HMG20AQ9NP66 347 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 KCND1Q9NSA2 647 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 ETNK2Q9NVF9 386 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 SALL3Q9BXA9 1300 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 DDTLA6NHG4 134 aaPredicted RBP12.87□□□□□ -0.35
SYNM-203ENST00000560674 FAM86B1E9PN63 330 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 SNPHO15079 494 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 SNX3O60493 162 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 PDE9AO76083 593 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 FAM86B2P0C5J1 330 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 ERVK-10P10266 1014 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 CSNK2BP67870 215 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 CNGA2Q16280 664 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 ZPBP2Q6X784 338 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 SYTL1Q8IYJ3 562 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 ANAPC2Q9UJX6 822 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 AP3M1Q9Y2T2 418 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 MYOM1P52179 1685 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 CSDE1O75534 798 aaKnown RBP12.87□□□□□ -0.35
SYNM-203ENST00000560674 ACAT1P24752 427 aaKnown RBP12.87□□□□□ -0.35
SYNM-203ENST00000560674 SREBF2Q12772 1141 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 ZNF618Q5T7W0 954 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 INTS5Q6P9B9 1019 aaKnown RBP12.87□□□□□ -0.35
SYNM-203ENST00000560674 B3GNT6Q6ZMB0 384 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 TSHZ1Q6ZSZ6 1077 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 STARD8Q92502 1023 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 REPS1Q96D71 796 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 PHACTR1Q9C0D0 580 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 ATP13A1Q9HD20 1204 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 KLHL1Q9NR64 748 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 ARHGAP28Q9P2N2 729 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 ZMYM5Q9UJ78 669 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 AK9Q5TCS8 1911 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 CHADO15335 359 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 MFN2O95140 757 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 YBX3P16989 372 aaKnown RBP eCLIP12.87□□□□□ -0.35
SYNM-203ENST00000560674 ATP12AP54707 1039 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 SLC12A3P55017 1021 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 PLCL1Q15111 1095 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 CBWD6Q4V339 395 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 RNF43Q68DV7 783 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 KLHL17Q6TDP4 642 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 MACC1Q6ZN28 852 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 NIPA1Q7RTP0 329 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 ILDR1Q86SU0 546 aaPredicted RBP12.87□□□□□ -0.35
SYNM-203ENST00000560674 ZNF276Q8N554 614 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 HGH1Q9BTY7 390 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 POLE3Q9NRF9 147 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 BLOC1S4Q9NUP1 217 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 SIK3Q9Y2K2 1263 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 TIMM13Q9Y5L4 95 aaPredicted RBP12.87□□□□□ -0.35
SYNM-203ENST00000560674 JCADQ9P266 1359 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 ZNF286BP0CG31 522 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 KDELR1P24390 212 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 S100A3P33764 101 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 PIK3CGP48736 1102 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 GPR15P49685 360 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 CHN2P52757 468 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 PLK1P53350 603 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 MAPK10P53779 464 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 C8orf59Q8N0T1 100 aaPredicted RBP12.87□□□□□ -0.35
SYNM-203ENST00000560674 MCOLN3Q8TDD5 553 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 IL17RBQ9NRM6 502 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 MRPL39Q9NYK5 338 aaKnown RBP12.87□□□□□ -0.35
SYNM-203ENST00000560674 INVSQ9Y283 1065 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 PCDHB5Q9Y5E4 795 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 ACTL7BQ9Y614 415 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 PIK3C2BO00750 1634 aa12.87□□□□□ -0.35
SYNM-203ENST00000560674 SRRM3A6NNA2 597 aaPredicted RBP12.86□□□□□ -0.35
SYNM-203ENST00000560674 OR56A5P0C7T3 313 aa12.86□□□□□ -0.35
SYNM-203ENST00000560674 ITGB3BPQ13352 177 aaPredicted RBP12.86□□□□□ -0.35
SYNM-203ENST00000560674 PARP6Q2NL67 630 aa12.86□□□□□ -0.35
SYNM-203ENST00000560674 KCTD21Q4G0X4 260 aa12.86□□□□□ -0.35
SYNM-203ENST00000560674 CDC73Q6P1J9 531 aa12.86□□□□□ -0.35
SYNM-203ENST00000560674 C16orf46Q6P387 395 aa12.86□□□□□ -0.35
SYNM-203ENST00000560674 WDR59Q6PJI9 974 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms