RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 PRR23D1E9PI22 279 aaPredicted RBP13.7□□□□□ -0.22
TRAF3-208ENST00000560371 ENO2P09104 434 aaPredicted RBP13.7□□□□□ -0.22
TRAF3-208ENST00000560371 PRR23D2P0DMB1 279 aaPredicted RBP13.7□□□□□ -0.22
TRAF3-208ENST00000560371 POU1F1P28069 291 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 GPR15P49685 360 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 PSMD5Q16401 504 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 MICU2Q8IYU8 434 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 CDK20Q8IZL9 346 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 ARL15Q9NXU5 204 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 DNPEPQ9ULA0 475 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 MRPL28Q13084 256 aaKnown RBP13.7□□□□□ -0.22
TRAF3-208ENST00000560371 CCDC81Q6ZN84 652 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 SYT17Q9BSW7 474 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 BBS2Q9BXC9 721 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 DPY30Q9C005 99 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 PIF1Q9H611 641 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 PDE2AO00408 941 aaPredicted RBP13.7□□□□□ -0.22
TRAF3-208ENST00000560371 BTN3A1O00481 513 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 USP1O94782 785 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 MT-CO1P00395 513 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 ZNF23P17027 643 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 ATP6V1C1P21283 382 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 AQP5P55064 265 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 DGKZQ13574 1117 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 C15orf59Q2T9L4 293 aaPredicted RBP13.7□□□□□ -0.22
TRAF3-208ENST00000560371 HAS1Q92839 578 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 MRPL48Q96GC5 212 aaKnown RBP13.7□□□□□ -0.22
TRAF3-208ENST00000560371 APOC4-APOC2K7ER74 178 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 M0R3G1 203 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 USP12O75317 370 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 APOC2P02655 101 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 OR1D2P34982 312 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 MAPK8P45983 427 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 IL2P60568 153 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 PPP3CAQ08209 521 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 NT5DC1Q5TFE4 455 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 CHPFQ8IZ52 775 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 TMEM161BQ8NDZ6 487 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 CAMTA1Q9Y6Y1 1673 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 E9PBE3 544 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 KLHL41O60662 606 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 CASP5P51878 434 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 CRY2Q49AN0 593 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 PLPP4Q5VZY2 271 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 CYP20A1Q6UW02 462 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 DUSP9Q99956 384 aaKnown RBP13.7□□□□□ -0.22
TRAF3-208ENST00000560371 PRRG3Q9BZD7 231 aa13.7□□□□□ -0.22
TRAF3-208ENST00000560371 CYP1A1P04798 512 aaPredicted RBP13.69□□□□□ -0.22
TRAF3-208ENST00000560371 PGAM1P18669 254 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 FMO4P31512 558 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 DUSP28Q4G0W2 176 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 ANKRD52Q8NB46 1076 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 HTR1BP28222 390 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 BMPR2Q13873 1038 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 MILR1Q7Z6M3 343 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 HNRNPLLQ8WVV9 542 aaKnown RBP13.69□□□□□ -0.22
TRAF3-208ENST00000560371 FAM120BQ96EK7 910 aaKnown RBP13.69□□□□□ -0.22
TRAF3-208ENST00000560371 YIPF3Q9GZM5 350 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 PRDM16Q9HAZ2 1276 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 MOXD2PA6NHM9 499 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 DLG4P78352 724 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 METTL3Q86U44 580 aaKnown RBP13.69□□□□□ -0.22
TRAF3-208ENST00000560371 GAS2L1Q99501 681 aaPredicted RBP13.69□□□□□ -0.22
TRAF3-208ENST00000560371 ASB8Q9H765 288 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 PSME2Q9UL46 239 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 XPO1O14980 1071 aaKnown RBP13.69□□□□□ -0.22
TRAF3-208ENST00000560371 CATP04040 527 aaKnown RBP13.69□□□□□ -0.22
TRAF3-208ENST00000560371 NOS3P29474 1203 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 SSTR1P30872 391 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 CDK16Q00536 496 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 PRR23CQ6ZRP0 262 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 COLGALT2Q8IYK4 626 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 MTMR8Q96EF0 704 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 STK39Q9UEW8 545 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 ZMYM5Q9UJ78 669 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.69□□□□□ -0.22
TRAF3-208ENST00000560371 DEAF1O75398 565 aaPredicted RBP13.69□□□□□ -0.22
TRAF3-208ENST00000560371 GLUD1P00367 558 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 CD86P42081 329 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 GPR1P46091 355 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 KCNMA1Q12791 1236 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 CAPSQ13938 189 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 RRP1BQ14684 758 aaKnown RBP13.69□□□□□ -0.22
TRAF3-208ENST00000560371 MARK2Q7KZI7 788 aaKnown RBP13.69□□□□□ -0.22
TRAF3-208ENST00000560371 PIGZQ86VD9 579 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 FAM126AQ9BYI3 521 aaPredicted RBP13.69□□□□□ -0.22
TRAF3-208ENST00000560371 ZNHIT2Q9UHR6 403 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 SALL3Q9BXA9 1300 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 A0A096LPK6 155 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 AGRPO00253 132 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 DDX3XO00571 662 aaKnown RBP eCLIP13.69□□□□□ -0.229e-11■■■■■ 31.2
TRAF3-208ENST00000560371 SARSP49591 514 aaKnown RBP13.69□□□□□ -0.22
TRAF3-208ENST00000560371 PLK1P53350 603 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 HSPA14Q0VDF9 509 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 TOMM20Q15388 145 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 WDR93Q6P2C0 686 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 SOHLH2Q9NX45 425 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 OPTCQ9UBM4 332 aa13.69□□□□□ -0.22
TRAF3-208ENST00000560371 ZSCAN5CA6NGD5 496 aaPredicted RBP13.68□□□□□ -0.22
TRAF3-208ENST00000560371 BTBD19C9JJ37 291 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms