RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 FAM170BA6NMN3 283 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 MAN2B1O00754 1011 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 DCLK1O15075 740 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 DDX3YO15523 660 aaKnown RBP9.3□□□□□ -0.92
HMG20A-209ENST00000559728 CREB3O43889 395 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 CLDN11O75508 207 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 PALMO75781 387 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 IPO7O95373 1038 aaKnown RBP9.3□□□□□ -0.92
HMG20A-209ENST00000559728 CD160O95971 181 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 CYBBP04839 570 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 RHOQP17081 205 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 ERCC2P18074 760 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 AOC1P19801 751 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 GRIA2P42262 883 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 HCAR3P49019 387 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 DGKGP49619 791 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 CDH4P55283 916 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 MMRN1Q13201 1228 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 DPYSL3Q14195 570 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 TAZQ16635 292 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 EFHC2Q5JST6 749 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 RABGAP1LQ5R372 815 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 TTC39BQ5VTQ0 682 aaPredicted RBP9.3□□□□□ -0.92
HMG20A-209ENST00000559728 AFMIDQ63HM1 303 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 GRAMD4Q6IC98 578 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 Q6ZS52 159 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 RFX8Q6ZV50 586 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 TFAP2DQ7Z6R9 452 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 MFN1Q8IWA4 741 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 ARHGAP12Q8IWW6 846 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 TP53INP2Q8IXH6 220 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 APCDD1Q8J025 514 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 CARNMT1Q8N4J0 409 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 RNF10Q8N5U6 811 aaKnown RBP9.3□□□□□ -0.92
HMG20A-209ENST00000559728 NPWQ8N729 165 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 TMEM105Q8N8V8 129 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 PJA1Q8NG27 643 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 PCDH19Q8TAB3 1148 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 HSPH1Q92598 858 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 ALG3Q92685 438 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 ANP32BQ92688 251 aaKnown RBP9.3□□□□□ -0.92
HMG20A-209ENST00000559728 RNF166Q96A37 237 aaPredicted RBP9.3□□□□□ -0.92
HMG20A-209ENST00000559728 TBC1D31Q96DN5 1066 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 MYO19Q96H55 970 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 MRGPRX3Q96LB0 322 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 CSPG4P5Q96PW8 444 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 XPO6Q96QU8 1125 aaKnown RBP9.3□□□□□ -0.92
HMG20A-209ENST00000559728 HERPUD2Q9BSE4 406 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 OSBPL6Q9BZF3 934 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 CD248Q9HCU0 757 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 ARHGEF4Q9NR80 690 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 PLSCR2Q9NRY7 297 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.3□□□□□ -0.92
HMG20A-209ENST00000559728 ABCB8Q9NUT2 735 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 POLR3BQ9NW08 1133 aaPredicted RBP9.3□□□□□ -0.92
HMG20A-209ENST00000559728 TMEM248Q9NWD8 314 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 DEC1Q9P2X7 70 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 GGA2Q9UJY4 613 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 STARD13Q9Y3M8 1113 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.3□□□□□ -0.92
HMG20A-209ENST00000559728 CUL9Q8IWT3 2517 aa9.3□□□□□ -0.92
HMG20A-209ENST00000559728 TICRRQ7Z2Z1 1910 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.29□□□□□ -0.92
HMG20A-209ENST00000559728 ZMPSTE24O75844 475 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 PTMAP06454 111 aaKnown RBP9.29□□□□□ -0.92
HMG20A-209ENST00000559728 DCNP07585 359 aaKnown RBP9.29□□□□□ -0.92
HMG20A-209ENST00000559728 KRT7P08729 469 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 PABPC1P11940 636 aaKnown RBP9.29□□□□□ -0.92
HMG20A-209ENST00000559728 HNRNPLP14866 589 aaKnown RBP eCLIP9.29□□□□□ -0.92
HMG20A-209ENST00000559728 DRD1P21728 446 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 AMPD1P23109 780 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 KDELR1P24390 212 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 EPHB2P29323 1055 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 CTNNA1P35221 906 aaKnown RBP9.29□□□□□ -0.92
HMG20A-209ENST00000559728 CSKP41240 450 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 CTSOP43234 321 aaPredicted RBP9.29□□□□□ -0.92
HMG20A-209ENST00000559728 TNFRSF4P43489 277 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 NUMBP49757 651 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 ADCY2Q08462 1091 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 ENPP2Q13822 863 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 PTPRNQ16849 979 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 PLEKHG6Q3KR16 790 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 SWT1Q5T5J6 900 aaKnown RBP9.29□□□□□ -0.92
HMG20A-209ENST00000559728 DCAF12L1Q5VU92 463 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 C1orf228Q6PIY5 440 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 DAAM2Q86T65 1068 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 SETD3Q86TU7 594 aaPredicted RBP9.29□□□□□ -0.92
HMG20A-209ENST00000559728 SUGP1Q8IWZ8 645 aaKnown RBP9.29□□□□□ -0.92
HMG20A-209ENST00000559728 RHOT1Q8IXI2 618 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 PQLC3Q8N755 202 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 RTL3Q8N8U3 475 aaKnown RBP9.29□□□□□ -0.92
HMG20A-209ENST00000559728 NETO2Q8NC67 525 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 USP33Q8TEY7 942 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 SORCS1Q8WY21 1168 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 TTC17Q96AE7 1141 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 SHDQ96IW2 340 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 CALR3Q96L12 384 aaKnown RBP9.29□□□□□ -0.92
HMG20A-209ENST00000559728 ACOX2Q99424 681 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 PHOX2BQ99453 314 aa9.29□□□□□ -0.92
HMG20A-209ENST00000559728 FEM1AQ9BSK4 669 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms