RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 ZNF667Q5HYK9 610 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 ALKAL1Q6UXT8 129 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 ANKRD33Q7Z3H0 272 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 ZNF571Q7Z3V5 609 aaPredicted RBP7.33□□□□□ -1.24
ZEB1-216ENST00000559496 FAM71AQ8IYT1 594 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 LINC01356Q8N9X3 169 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 NETO2Q8NC67 525 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 DIS3LQ8TF46 1054 aaKnown RBP7.33□□□□□ -1.24
ZEB1-216ENST00000559496 COG1Q8WTW3 980 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 TAF4BQ92750 862 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 PPP2R3CQ969Q6 453 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 ZMAT2Q96NC0 199 aaKnown RBP7.33□□□□□ -1.24
ZEB1-216ENST00000559496 RPS6KC1Q96S38 1066 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 PNKPQ96T60 521 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 ADAM2Q99965 735 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 IFIH1Q9BYX4 1025 aaKnown RBP7.33□□□□□ -1.24
ZEB1-216ENST00000559496 XYLT2Q9H1B5 865 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 EPN3Q9H201 632 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 CXCL16Q9H2A7 254 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 TUBA8Q9NY65 449 aaPredicted RBP7.33□□□□□ -1.24
ZEB1-216ENST00000559496 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.33□□□□□ -1.24
ZEB1-216ENST00000559496 WDR35Q9P2L0 1181 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 GULP1Q9UBP9 304 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 NUDT5Q9UKK9 219 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 UBQLN1Q9UMX0 589 aaKnown RBP7.33□□□□□ -1.24
ZEB1-216ENST00000559496 AGAP1Q9UPQ3 857 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 ASB3Q9Y575 518 aa7.33□□□□□ -1.24
ZEB1-216ENST00000559496 PDCD11Q14690 1871 aaKnown RBP7.32□□□□□ -1.24
ZEB1-216ENST00000559496 HTTP42858 3142 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 SMIM28A0A1B0GU29 152 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 NPHS1O60500 1241 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 ZNF623O75123 536 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 ATP6V1G2O95670 118 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 RPSAP08865 295 aaKnown RBP7.32□□□□□ -1.24
ZEB1-216ENST00000559496 CCDC166P0CW27 439 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 COL6A1P12109 1028 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 P4HA1P13674 534 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 IBSPP21815 317 aaPredicted RBP7.32□□□□□ -1.24
ZEB1-216ENST00000559496 MLH1P40692 756 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 VSNL1P62760 191 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 MRPS35P82673 323 aaKnown RBP7.32□□□□□ -1.24
ZEB1-216ENST00000559496 TLE2Q04725 743 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 GFPT1Q06210 699 aaPredicted RBP7.32□□□□□ -1.24
ZEB1-216ENST00000559496 SLC9A5Q14940 896 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 ZBTB6Q15916 424 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 SLC18A3Q16572 532 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 ASTE1Q2TB18 679 aaPredicted RBP7.32□□□□□ -1.24
ZEB1-216ENST00000559496 SCARA5Q6ZMJ2 495 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 GET4Q7L5D6 327 aaPredicted RBP7.32□□□□□ -1.24
ZEB1-216ENST00000559496 MRPL10Q7Z7H8 261 aaKnown RBP7.32□□□□□ -1.24
ZEB1-216ENST00000559496 RNF169Q8NCN4 708 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 C1orf131Q8NDD1 294 aaKnown RBP7.32□□□□□ -1.24
ZEB1-216ENST00000559496 USP33Q8TEY7 942 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 LPPQ93052 612 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 SLC35B4Q969S0 331 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 C18orf25Q96B23 403 aaPredicted RBP7.32□□□□□ -1.24
ZEB1-216ENST00000559496 PGBD4Q96DM1 585 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 TSPAN17Q96FV3 270 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 PEX11GQ96HA9 241 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 HPDLQ96IR7 371 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 MRGPRX3Q96LB0 322 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 TRAPPC9Q96Q05 1148 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 KRTAP4-2Q9BYR5 136 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 BRD8Q9H0E9 1235 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 HIPK3Q9H422 1215 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 C11orf49Q9H6J7 331 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 TMEM165Q9HC07 324 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 NOD2Q9HC29 1040 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 ACTR10Q9NZ32 417 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 CLEC1BQ9P126 229 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 MYO1AQ9UBC5 1043 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 FBLN5Q9UBX5 448 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 TUBGCP4Q9UGJ1 667 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 ATP11BQ9Y2G3 1177 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 GIT1Q9Y2X7 761 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 TMED5Q9Y3A6 229 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 REXO2Q9Y3B8 237 aaKnown RBP7.32□□□□□ -1.24
ZEB1-216ENST00000559496 PCDHB4Q9Y5E5 795 aa7.32□□□□□ -1.24
ZEB1-216ENST00000559496 A0A087X0T9 212 aa7.31□□□□□ -1.24
ZEB1-216ENST00000559496 A0A0U1RQF3 1178 aa7.31□□□□□ -1.24
ZEB1-216ENST00000559496 CTAGE15A4D2H0 777 aa7.31□□□□□ -1.24
ZEB1-216ENST00000559496 B8ZZF3 427 aa7.31□□□□□ -1.24
ZEB1-216ENST00000559496 PTGESO14684 152 aa7.31□□□□□ -1.24
ZEB1-216ENST00000559496 ZNF263O14978 683 aa7.31□□□□□ -1.24
ZEB1-216ENST00000559496 NBNO60934 754 aa7.31□□□□□ -1.24
ZEB1-216ENST00000559496 ZNF189O75820 626 aaPredicted RBP7.31□□□□□ -1.24
ZEB1-216ENST00000559496 KRT38O76015 456 aa7.31□□□□□ -1.24
ZEB1-216ENST00000559496 LCA5LO95447 670 aa7.31□□□□□ -1.24
ZEB1-216ENST00000559496 FAM228BP0C875 321 aa7.31□□□□□ -1.24
ZEB1-216ENST00000559496 CTAGE8P0CG41 777 aa7.31□□□□□ -1.24
ZEB1-216ENST00000559496 ATF2P15336 505 aa7.31□□□□□ -1.24
ZEB1-216ENST00000559496 ATF7P17544 494 aaPredicted RBP7.31□□□□□ -1.24
ZEB1-216ENST00000559496 CD58P19256 250 aa7.31□□□□□ -1.24
ZEB1-216ENST00000559496 ACO1P21399 889 aaKnown RBP7.31□□□□□ -1.24
ZEB1-216ENST00000559496 TNFAIP3P21580 790 aa7.31□□□□□ -1.24
ZEB1-216ENST00000559496 MAGEA1P43355 309 aa7.31□□□□□ -1.24
ZEB1-216ENST00000559496 LIMS1P48059 325 aa7.31□□□□□ -1.24
ZEB1-216ENST00000559496 PDE6CP51160 858 aa7.31□□□□□ -1.24
ZEB1-216ENST00000559496 INHBCP55103 352 aa7.31□□□□□ -1.24
ZEB1-216ENST00000559496 BPIFB4P59827 614 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms