RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 CD82P27701 267 aa10.03□□□□□ -0.8
SMAD3-211ENST00000559460 MZF1P28698 734 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-211ENST00000559460 CSKP41240 450 aa10.03□□□□□ -0.8
SMAD3-211ENST00000559460 NAA30Q147X3 362 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-211ENST00000559460 DEFB133Q30KQ1 61 aa10.03□□□□□ -0.8
SMAD3-211ENST00000559460 ZNF542PQ5EBM4 170 aa10.03□□□□□ -0.8
SMAD3-211ENST00000559460 CLEC20AQ6ZU45 233 aa10.03□□□□□ -0.8
SMAD3-211ENST00000559460 PTAR1Q7Z6K3 402 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-211ENST00000559460 KIAA0907Q7Z7F0 614 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-211ENST00000559460 HEATR4Q86WZ0 1026 aa10.03□□□□□ -0.8
SMAD3-211ENST00000559460 DCP2Q8IU60 420 aaKnown RBP10.03□□□□□ -0.8
SMAD3-211ENST00000559460 ZC3H3Q8IXZ2 948 aaKnown RBP10.03□□□□□ -0.8
SMAD3-211ENST00000559460 STK40Q8N2I9 435 aa10.03□□□□□ -0.8
SMAD3-211ENST00000559460 ZNF548Q8NEK5 533 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-211ENST00000559460 OR13H1Q8NG92 308 aa10.03□□□□□ -0.8
SMAD3-211ENST00000559460 FAM174AQ8TBP5 190 aa10.03□□□□□ -0.8
SMAD3-211ENST00000559460 CCDC127Q96BQ5 260 aa10.03□□□□□ -0.8
SMAD3-211ENST00000559460 TMEM74Q96NL1 305 aa10.03□□□□□ -0.8
SMAD3-211ENST00000559460 CATSPER2Q96P56 530 aa10.03□□□□□ -0.8
SMAD3-211ENST00000559460 GFM1Q96RP9 751 aaKnown RBP10.03□□□□□ -0.8
SMAD3-211ENST00000559460 CCDC3Q9BQI4 270 aa10.03□□□□□ -0.8
SMAD3-211ENST00000559460 PREBQ9HCU5 417 aa10.03□□□□□ -0.8
SMAD3-211ENST00000559460 OLA1Q9NTK5 396 aaKnown RBP10.03□□□□□ -0.8
SMAD3-211ENST00000559460 STIM2Q9P246 746 aa10.03□□□□□ -0.8
SMAD3-211ENST00000559460 IPO11Q9UI26 975 aaKnown RBP10.03□□□□□ -0.8
SMAD3-211ENST00000559460 CSNK1G3Q9Y6M4 447 aa10.03□□□□□ -0.8
SMAD3-211ENST00000559460 C2CD3Q4AC94 2353 aa10.02□□□□□ -0.8
SMAD3-211ENST00000559460 TTC34A8MYJ7 566 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 C1QTNF3-AMACRE9PGA6 284 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 AQP9O43315 295 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 LATS1O95835 1130 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 KRT7P08729 469 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 HGFP14210 728 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 PRLRP16471 622 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 HNRNPA2B1P22626 353 aaKnown RBP10.02□□□□□ -0.81
SMAD3-211ENST00000559460 CD97P48960 835 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 KIF11P52732 1056 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 IRX6P78412 446 aaPredicted RBP10.02□□□□□ -0.81
SMAD3-211ENST00000559460 CCDC15Q0P6D6 951 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 KLRB1Q12918 225 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 CDH18Q13634 790 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 SEPT6Q14141 434 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 FGL2Q14314 439 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 ARID5BQ14865 1188 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 BMT2Q1RMZ1 405 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 LACTB2Q53H82 288 aaPredicted RBP10.02□□□□□ -0.81
SMAD3-211ENST00000559460 PERM1Q5SV97 790 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 MPP7Q5T2T1 576 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 ADGRF1Q5T601 910 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 TMEM164Q5U3C3 297 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 MCTP1Q6DN14 999 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 ESRP1Q6NXG1 681 aaKnown RBP10.02□□□□□ -0.81
SMAD3-211ENST00000559460 SCD5Q86SK9 330 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 ZFAND4Q86XD8 727 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 TICAM1Q8IUC6 712 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 LMX1AQ8TE12 382 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 RNF139Q8WU17 664 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 OR8D1Q8WZ84 308 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 TTC17Q96AE7 1141 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 MYO19Q96H55 970 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 SPAG5Q96R06 1193 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 STRA6Q9BX79 667 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 CUEDC1Q9NWM3 386 aaPredicted RBP10.02□□□□□ -0.81
SMAD3-211ENST00000559460 ERVW-1Q9UQF0 538 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 KIF3AQ9Y496 699 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 LOXL2Q9Y4K0 774 aa10.02□□□□□ -0.81
SMAD3-211ENST00000559460 ARID1BQ8NFD5 2236 aaPredicted RBP10.02□□□□□ -0.81
SMAD3-211ENST00000559460 PRAMEF33A0A0G2JMD5 474 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 A0A1W2PQ27 194 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 A0A1W2PQ64 194 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 A0A1W2PQC6 194 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 C10orf142B7Z368 130 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 HHLA1C9JL84 531 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 PRAMEF10O60809 474 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 ZNF18P17022 549 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 DRD3P35462 400 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 DCTP40126 519 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 NDST1P52848 882 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 MAPK10P53779 464 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 YWHAGP61981 247 aaKnown RBP eCLIP10.01□□□□□ -0.81
SMAD3-211ENST00000559460 ECT2LQ008S8 904 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 DRAP1Q14919 205 aaPredicted RBP10.01□□□□□ -0.81
SMAD3-211ENST00000559460 TRIP4Q15650 581 aaPredicted RBP10.01□□□□□ -0.81
SMAD3-211ENST00000559460 SNRNP35Q16560 246 aaKnown RBP10.01□□□□□ -0.81
SMAD3-211ENST00000559460 CENPQQ7L2Z9 268 aaPredicted RBP10.01□□□□□ -0.81
SMAD3-211ENST00000559460 MAMDC2Q7Z304 686 aaPredicted RBP10.01□□□□□ -0.81
SMAD3-211ENST00000559460 PARGQ86W56 976 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 UNC93AQ86WB7 457 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 CARNMT1Q8N4J0 409 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 C12orf29Q8N999 325 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 TEX19Q8NA77 164 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 TMEM145Q8NBT3 493 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 BTN2A2Q8WVV5 523 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 KLK6Q92876 244 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 TMEM159Q96B96 161 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 CYFIP2Q96F07 1278 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 FAM129BQ96TA1 746 aa10.01□□□□□ -0.81
SMAD3-211ENST00000559460 LLPHQ9BRT6 129 aaKnown RBP10.01□□□□□ -0.81
SMAD3-211ENST00000559460 ZNF768Q9H5H4 540 aaKnown RBP10.01□□□□□ -0.81
SMAD3-211ENST00000559460 FZD3Q9NPG1 666 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms