RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 ITM2CQ9NQX7 267 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 TMEM74BQ9NUR3 256 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 SEPT11Q9NVA2 429 aaKnown RBP11.28□□□□□ -0.6
SPG11-216ENST00000559347 TMEM51Q9NW97 253 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 ADAM22Q9P0K1 906 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 EVLQ9UI08 416 aaPredicted RBP11.28□□□□□ -0.6
SPG11-216ENST00000559347 PILRBQ9UKJ0 227 aa11.28□□□□□ -0.6
SPG11-216ENST00000559347 GON4LQ3T8J9 2241 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 IGLV3-10A0A075B6K4 115 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 C2CD4BA6NLJ0 364 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 SIN3BO75182 1162 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 CLDN11O75508 207 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 ENDOD1O94919 500 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 SDC4P31431 198 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 STK19P49842 368 aaPredicted RBP11.27□□□□□ -0.61
SPG11-216ENST00000559347 PLK1P53350 603 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 CDH4P55283 916 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 OXCT1P55809 520 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 ATP11AP98196 1134 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 ECT2LQ008S8 904 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 CDO1Q16878 200 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 C15orf59Q2T9L4 293 aaPredicted RBP11.27□□□□□ -0.61
SPG11-216ENST00000559347 ZSCAN23Q3MJ62 389 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 ALFQ53S48 1182 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 TRIM61Q5EBN2 209 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 ARTNQ5T4W7 220 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 ACBD5Q5T8D3 534 aaPredicted RBP11.27□□□□□ -0.61
SPG11-216ENST00000559347 IRF2BP2Q7Z5L9 587 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 PHLDB2Q86SQ0 1253 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 RXFP2Q8WXD0 754 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 ALG14Q96F25 216 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 TOE1Q96GM8 510 aaKnown RBP11.27□□□□□ -0.61
SPG11-216ENST00000559347 RPL10LQ96L21 214 aaKnown RBP11.27□□□□□ -0.61
SPG11-216ENST00000559347 RSPH9Q9H1X1 276 aaPredicted RBP11.27□□□□□ -0.61
SPG11-216ENST00000559347 SUN2Q9UH99 717 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 TBC1D30Q9Y2I9 924 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 SNX10Q9Y5X0 201 aa11.27□□□□□ -0.61
SPG11-216ENST00000559347 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.26□□□□□ -0.61
SPG11-216ENST00000559347 EDDM13A0A1B0GTR0 161 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 TCRBV5S1A1TA0A578 114 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 MEI4A8MW99 385 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 TTC34A8MYJ7 566 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 E9PAM4 449 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 KHNYNO15037 678 aaKnown RBP11.26□□□□□ -0.61
SPG11-216ENST00000559347 NDUFS2O75306 463 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 CNTN5O94779 1100 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 SERPINC1P01008 464 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 DNTTP04053 509 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 CCDC172P0C7W6 258 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 OXTRP30559 389 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 RPS14P62263 151 aaKnown RBP11.26□□□□□ -0.61
SPG11-216ENST00000559347 ZBTB16Q05516 673 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 SULT2A1Q06520 285 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 ZNF177Q13360 481 aaPredicted RBP11.26□□□□□ -0.61
SPG11-216ENST00000559347 CCDC14Q49A88 953 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 TTC31Q49AM3 519 aaPredicted RBP11.26□□□□□ -0.61
SPG11-216ENST00000559347 SH3PXD2AQ5TCZ1 1133 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 STPG1Q5TH74 334 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 RNF219Q5W0B1 726 aaPredicted RBP11.26□□□□□ -0.61
SPG11-216ENST00000559347 ZNF776Q68DI1 518 aaPredicted RBP11.26□□□□□ -0.61
SPG11-216ENST00000559347 SLC23A3Q6PIS1 610 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 STRADAQ7RTN6 431 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 FOXJ1Q92949 421 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 ZNF419Q96HQ0 510 aaPredicted RBP11.26□□□□□ -0.61
SPG11-216ENST00000559347 C1orf74Q96LT6 269 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 HAPLN3Q96S86 360 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 FEM1AQ9BSK4 669 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 SELENOOQ9BVL4 669 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 GPR174Q9BXC1 333 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 ZNF212Q9UDV6 495 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 SLCO3A1Q9UIG8 710 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 OR51B4Q9Y5P0 310 aa11.26□□□□□ -0.61
SPG11-216ENST00000559347 NCOR2Q9Y618 2525 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 TARSL2A2RTX5 802 aaKnown RBP11.25□□□□□ -0.61
SPG11-216ENST00000559347 DCDC2BA2VCK2 349 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 DRGXA6NNA5 263 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 RHOCP08134 193 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 KRT3P12035 628 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 GPD1P21695 349 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 ACSL1P33121 698 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 RFC1P35251 1148 aaPredicted RBP11.25□□□□□ -0.61
SPG11-216ENST00000559347 PBX1P40424 430 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 PRKCIP41743 596 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 HDAC4P56524 1084 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 TPM4P67936 248 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 IRX4P78413 519 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 FANCCQ00597 558 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 FOXK2Q01167 660 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 NR1I3Q14994 352 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 CST6Q15828 149 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 ASIC2Q16515 512 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 FIGNQ5HY92 759 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 PPP1R15BQ5SWA1 713 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 C9orf64Q5T6V5 341 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 MANEALQ5VSG8 457 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 DNAJC24Q6P3W2 148 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 LRRC31Q6UY01 552 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 RABEPKQ7Z6M1 372 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 TFAP2DQ7Z6R9 452 aa11.25□□□□□ -0.61
SPG11-216ENST00000559347 SETD3Q86TU7 594 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms