RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 DEFB119Q8N690 84 aa13.02□□□□□ -0.33
RABGGTA-207ENST00000558936 PTPRN2Q92932 1015 aa13.02□□□□□ -0.33
RABGGTA-207ENST00000558936 VCPIP1Q96JH7 1222 aa13.02□□□□□ -0.33
RABGGTA-207ENST00000558936 RPRD1AQ96P16 312 aaPredicted RBP13.02□□□□□ -0.33
RABGGTA-207ENST00000558936 HAPLN3Q96S86 360 aa13.02□□□□□ -0.33
RABGGTA-207ENST00000558936 FAM129BQ96TA1 746 aa13.02□□□□□ -0.33
RABGGTA-207ENST00000558936 NUP58Q9BVL2 599 aa13.02□□□□□ -0.33
RABGGTA-207ENST00000558936 KLC2Q9H0B6 622 aa13.02□□□□□ -0.33
RABGGTA-207ENST00000558936 THAP2Q9H0W7 228 aa13.02□□□□□ -0.33
RABGGTA-207ENST00000558936 GPATCH2LQ9NWQ4 482 aa13.02□□□□□ -0.33
RABGGTA-207ENST00000558936 NCDNQ9UBB6 729 aa13.02□□□□□ -0.33
RABGGTA-207ENST00000558936 SERGEFQ9UGK8 458 aa13.02□□□□□ -0.33
RABGGTA-207ENST00000558936 ERVW-1Q9UQF0 538 aa13.02□□□□□ -0.33
RABGGTA-207ENST00000558936 A0A1B0GVM2 712 aa13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 TCAF2A6NFQ2 919 aa13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 SMAD6O43541 496 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 LRIG2O94898 1065 aa13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 SERPING1P05155 500 aa13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 SLC2A3P11169 496 aa13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 EIF4A3P38919 411 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 NRG1Q02297 640 aaPredicted RBP13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 GFPT1Q06210 699 aaPredicted RBP13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 SCAPQ12770 1279 aa13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 PMS2CLQ68D20 193 aa13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 DNAJC24Q6P3W2 148 aa13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 TFAP2DQ7Z6R9 452 aa13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 TP53INP2Q8IXH6 220 aa13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 OR7D4Q8NG98 312 aa13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 WFIKKN2Q8TEU8 576 aa13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 RNF34Q969K3 372 aa13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 SELENOOQ9BVL4 669 aa13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 OSBPL2Q9H1P3 480 aa13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 POLMQ9NP87 494 aaPredicted RBP13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 USP36Q9P275 1121 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 CNOT8Q9UFF9 292 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 RAB23Q9ULC3 237 aa13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 FZD10Q9ULW2 581 aa13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 CEP250Q9BV73 2442 aa13.01□□□□□ -0.33
RABGGTA-207ENST00000558936 PLXNA2O75051 1894 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 PATE3B3GLJ2 98 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 H0Y626 953 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 TIMM44O43615 452 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 GDF9O60383 454 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 SRGAP2O75044 1071 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 SIN3BO75182 1162 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 F9P00740 461 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 EPHX1P07099 455 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 RETP07949 1114 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 SDC4P31431 198 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 ACVRL1P37023 503 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 CDH4P55283 916 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 RPS14P62263 151 aaKnown RBP13□□□□□ -0.33
RABGGTA-207ENST00000558936 ARF5P84085 180 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 SPEM2Q0P670 501 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 SPECC1LQ69YQ0 1117 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 TCEAL6Q6IPX3 200 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 CACUL1Q86Y37 369 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 TMPRSS6Q8IU80 811 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 KIAA2013Q8IYS2 634 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 TC2NQ8N9U0 490 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 NETO2Q8NC67 525 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 TCEAL3Q969E4 200 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 NTAN1Q96AB6 310 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 DDX50Q9BQ39 737 aaKnown RBP13□□□□□ -0.33
RABGGTA-207ENST00000558936 HINFPQ9BQA5 517 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 ORAI3Q9BRQ5 295 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 ITM2CQ9NQX7 267 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 KIAA1522Q9P206 1035 aaPredicted RBP13□□□□□ -0.33
RABGGTA-207ENST00000558936 OR12D3Q9UGF7 316 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 SARDHQ9UL12 918 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 LUC7L2Q9Y383 392 aaKnown RBP13□□□□□ -0.33
RABGGTA-207ENST00000558936 MFHAS1Q9Y4C4 1052 aa13□□□□□ -0.33
RABGGTA-207ENST00000558936 SPTBN4Q9H254 2564 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 MFAP3LO75121 409 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 LRCH4O75427 683 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 ALDH1A2O94788 518 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 EPN2O95208 641 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 IGLV3-19P01714 112 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 CYP1A2P05177 515 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 POLR2EP19388 210 aaKnown RBP12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 TPMTP51580 245 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 GALCP54803 685 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 MAPK8IP2Q13387 824 aaPredicted RBP12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 CDH18Q13634 790 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 HNRNPA1L2Q32P51 320 aaKnown RBP12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 RNF219Q5W0B1 726 aaPredicted RBP12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 SDE2Q6IQ49 451 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 SERPINA13PQ6UXR4 307 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 TMC6Q7Z403 805 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 TMEFF1Q8IYR6 380 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 CNPY3Q9BT09 278 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 ARRDC1-AS1Q9H2J1 176 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 ABHD10Q9NUJ1 306 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 PPARGC1AQ9UBK2 798 aaKnown RBP12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 VPS51Q9UID3 782 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 GMEB2Q9UKD1 530 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 CYP8B1Q9UNU6 501 aa12.99□□□□□ -0.33
RABGGTA-207ENST00000558936 TFR2Q9UP52 801 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms